RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 FRMD8P1Q9BZ68 369 aaPredicted RBP6.34□□□□□ -1.4
RTTN-209ENST00000583043 ZHX2Q9Y6X8 837 aa6.34□□□□□ -1.4
RTTN-209ENST00000583043 USP17L10C9JJH3 530 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 FOXN1O15353 648 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 EVI5O60447 810 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 MARSP56192 900 aaKnown RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 RWDD2BP57060 319 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 CCNA1P78396 465 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 CDC42EP1Q00587 391 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 TCP10Q12799 353 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 KRT71Q3SY84 523 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 CDC42EP5Q6NZY7 148 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 KCTD1Q719H9 257 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 FAM83AQ86UY5 434 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 SFR1Q86XK3 245 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 MAP7D3Q8IWC1 876 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 RBM46Q8TBY0 533 aaKnown RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 TSNARE1Q96NA8 513 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 TTC25Q96NG3 672 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 SLC4A9Q96Q91 983 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 VCPKMTQ9H867 229 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 SENP2Q9HC62 589 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 RGPD8O14715 1765 aaPredicted RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 KCNQ2O43526 872 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 EHHADHQ08426 723 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 MKRN3Q13064 507 aaKnown RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 DOK7Q18PE1 504 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 HACE1Q8IYU2 909 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 RBM41Q96IZ5 413 aaKnown RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 STRIP2Q9ULQ0 834 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 CRYBG1Q9Y4K1 1723 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 ZNF233A6NK53 670 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 PIK3CDO00329 1044 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 IPO5O00410 1097 aaKnown RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 AP5Z1O43299 807 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 NMT2O60551 498 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 ECEL1O95672 775 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 HOXC6P09630 235 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 KRT5P13647 590 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 RXRBP28702 533 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 PBX1P40424 430 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 FXR1P51114 621 aaKnown RBP eCLIP6.33□□□□□ -1.4
RTTN-209ENST00000583043 DNA2P51530 1060 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 EFNA5P52803 228 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 GRB10Q13322 594 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 CACNA2D3Q8IZS8 1091 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 GPRASP2Q96D09 838 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 CABS1Q96KC9 395 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 CCDC113Q9H0I3 377 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 FAM204AQ9H8W3 233 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 ATP6V0A4Q9HBG4 840 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 KMT5AQ9NQR1 393 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 DBR1Q9UK59 544 aaKnown RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 CSADQ9Y600 493 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 MYMKA6NI61 221 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 GUCY2CP25092 1073 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 CYP2C19P33261 490 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 CYP2J2P51589 502 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 SARNPP82979 210 aaKnown RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 TNFAIP2Q03169 654 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 PADI6Q6TGC4 694 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 NSMFQ6X4W1 530 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 PDZD4Q76G19 769 aaPredicted RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 FBF1Q8TES7 1133 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 MTMR9Q96QG7 549 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 EIF2AK1Q9BQI3 630 aaKnown RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 TAF1DQ9H5J8 278 aaPredicted RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 PPP2R3BQ9Y5P8 575 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 C10orf71Q711Q0 1435 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 PLSCR1O15162 318 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 CALB1P05937 261 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 ALAS1P13196 640 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 GYS1P13807 737 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 OAZ1P54368 228 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 GUCY2DQ02846 1103 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 NEDD9Q14511 834 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 AGBL2Q5U5Z8 902 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 BTNL9Q6UXG8 535 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 CCNI2Q6ZMN8 369 aaPredicted RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 CCDC89Q8N998 374 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 HPS3Q969F9 1004 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 WDR24Q96S15 920 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 HAUS2Q9NVX0 235 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 RNF216Q9NWF9 866 aaPredicted RBP6.33□□□□□ -1.4
RTTN-209ENST00000583043 AIPL1Q9NZN9 384 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 ADAM21Q9UKJ8 722 aa6.33□□□□□ -1.4
RTTN-209ENST00000583043 ARFGEF2Q9Y6D5 1785 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 ARHGEF37A1IGU5 675 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 POTEMA6NI47 508 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 DGAT1O75907 488 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 TDP2O95551 362 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 GH2P01242 217 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 GNGT1P63211 74 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 LACTBP83111 547 aaPredicted RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 STK4Q13043 487 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 CEP85LQ5SZL2 805 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 PCGF5Q86SE9 256 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 KLHL7Q8IXQ5 586 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 FAM133AQ8N9E0 248 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms