RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SEPT8Q92599 483 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 OSBPL7Q9BZF2 842 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 TTC12Q9H892 705 aaPredicted RBP14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 WDR81Q562E7 1941 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 ABHD14A-ACY1A0A1B0GW23 586 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 DDX11L8A8MPP1 907 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 DKC1O60832 514 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 EFCAB14O75071 495 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 C22orf31O95567 290 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 U2AF2P26368 475 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 PBX2P40425 430 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 QARSP47897 775 aaKnown RBP14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 WDR5P61964 334 aaKnown RBP14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 CUL4AQ13619 759 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 EPHA7Q15375 998 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 MTERF2Q49AM1 385 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 PLEKHG4Q58EX7 1191 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 XKR3Q5GH77 459 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 LARP1BQ659C4 914 aaKnown RBP14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 FAM161BQ96MY7 647 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 SLC9A7Q96T83 725 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 PBX4Q9BYU1 374 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 IFIH1Q9BYX4 1025 aaKnown RBP14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 TMEM60Q9H2L4 133 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 MSRAQ9UJ68 235 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 TRPV2Q9Y5S1 764 aa14.15□□□□□ -0.14
SMARCE1-218ENST00000582955 TMEM150BA6NC51 233 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 K7ELQ4 463 aaPredicted RBP14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 MAGEB2O15479 319 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 P4HBP07237 508 aaKnown RBP14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 TRAPPC10P48553 1259 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 RABGGTBP53611 331 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 CYP4A11Q02928 519 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 SPIRE1Q08AE8 756 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 TBC1D8BQ0IIM8 1120 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 ORC2Q13416 577 aaPredicted RBP14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 NBR1Q14596 966 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 LPIN1Q14693 890 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 RAB30Q15771 203 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 KIAA0319LQ8IZA0 1049 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 NME8Q8N427 588 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 TIFAQ96CG3 184 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 DYDC2Q96IM9 177 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 MTMR9Q96QG7 549 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 SH2D3AQ9BRG2 576 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 LXNQ9BS40 222 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 RGL1Q9NZL6 768 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 GINS2Q9Y248 185 aa14.14□□□□□ -0.15
SMARCE1-218ENST00000582955 SLC34A2O95436 690 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 OR52Z1P0C646 297 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 TMOD1P28289 359 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 CLCN3P51790 818 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 DEFB103AP81534 67 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 CTTNQ14247 550 aaKnown RBP14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 FBXO47Q5MNV8 452 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 PLA2G4FQ68DD2 849 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 EFCAB12Q6NXP0 572 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 TPH2Q8IWU9 490 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 LRRC71Q8N4P6 559 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 PHOSPHO2Q8TCD6 241 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 APBB2Q92870 758 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 MAP7D2Q96T17 732 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 PPP1R16BQ96T49 567 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 EIF2AK1Q9BQI3 630 aaKnown RBP14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 NIFKQ9BYG3 293 aaKnown RBP14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 CELF4Q9BZC1 486 aaKnown RBP14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 SUGCTQ9HAC7 445 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 AKT3Q9Y243 479 aa14.13□□□□□ -0.15
SMARCE1-218ENST00000582955 POTEMA6NI47 508 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 HAX1O00165 279 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 STBD1O95210 358 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 AMHP03971 560 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 VTNP04004 478 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 TARBP2Q15633 366 aaKnown RBP14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 KIZQ2M2Z5 673 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 TSHZ1Q6ZSZ6 1077 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 ANO5Q75V66 913 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 TMCO2Q7Z6W1 182 aaPredicted RBP14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 HERC6Q8IVU3 1022 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 ZBED2Q9BTP6 218 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 NKX2-4Q9H2Z4 354 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 ZSWIM4Q9H7M6 989 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 WRAP73Q9P2S5 460 aaPredicted RBP14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 YBX2Q9Y2T7 364 aaKnown RBP14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 PCDHB6Q9Y5E3 794 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 PCDHA11Q9Y5I1 949 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 SIP14410 1827 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 EVPLQ92817 2033 aa14.12□□□□□ -0.15
SMARCE1-218ENST00000582955 TMEM265A0A087WTH1 108 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 VPS37CA5D8V6 355 aaPredicted RBP14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 MYOGP15173 224 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 PDCP20941 246 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 CD52P31358 61 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 YWHABP31946 246 aaKnown RBP14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 TECP42680 631 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 TOB1P50616 345 aaPredicted RBP14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 NPEPPSP55786 919 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 PAK2Q13177 524 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms