RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 POTECB2RU33 542 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 POU5F1Q01860 360 aaKnown RBP11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 APBA1Q02410 837 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 MTMR2Q13614 643 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 RAPGEF1Q13905 1077 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 TTLL4Q14679 1199 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 RIOX2Q8IUF8 465 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 ETNPPLQ8TBG4 499 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 DYDC2Q96IM9 177 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 PBKQ96KB5 322 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 TSPAN18Q96SJ8 248 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 GGA3Q9NZ52 723 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 PYCARDQ9ULZ3 195 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 DDX60LQ5H9U9 1706 aaKnown RBP11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 NR3C2P08235 984 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 VCAM1P19320 739 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 MAN1A1P33908 653 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 PCBP1Q15365 356 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 MIGA2Q7L4E1 593 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 GRAMD1CQ8IYS0 662 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 UBL4BQ8N7F7 174 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 PARK7Q99497 189 aaKnown RBP11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 INO80BQ9C086 356 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 JPH1Q9HDC5 661 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 FEZ2Q9UHY8 353 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 V9GYY5 206 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 ARHGEF37A1IGU5 675 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 CCDC169A6NNP5 214 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 GTF2A2P52657 109 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 MXD4Q14582 209 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 R3HDM1Q15032 1099 aaKnown RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 DEFB132Q7Z7B7 95 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 SFR1Q86XK3 245 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 RHOT2Q8IXI1 618 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 TMC2Q8TDI7 906 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZNF830Q96NB3 372 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 NT5C1BQ96P26 610 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 PNMA5Q96PV4 448 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 AGO4Q9HCK5 861 aaKnown RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 TMEM51Q9NW97 253 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 RPTORQ8N122 1335 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 SLC37A4O43826 429 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 H2AFZP0C0S5 128 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 GARTP22102 1010 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 LIG4P49917 911 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 H2AFVQ71UI9 128 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 MSL3Q8N5Y2 521 aaKnown RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 TSPYL1Q9H0U9 437 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 RAVER2Q9HCJ3 691 aaKnown RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 RNF216Q9NWF9 866 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 MTUS1Q9ULD2 1270 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 IGSF9BQ9UPX0 1349 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 GRID2IPA4D2P6 1211 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 GOLGA6L10A6NI86 522 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 STRNO43815 780 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 PSMD10O75832 226 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 ATP1A3P13637 1013 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 FECHP22830 423 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 TBXAS1P24557 533 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 FMR1Q06787 632 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 CFAP221Q4G0U5 840 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 DCAF17Q5H9S7 520 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 CATSPERGQ6ZRH7 1159 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 CCDC26Q8TAB7 109 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 SYTL5Q8TDW5 730 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 PXMP2Q9NR77 195 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 SAR1BQ9Y6B6 198 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 VWA5AO00534 786 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 PHACTR2O75167 634 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 FCER1AP12319 257 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 PDXDC1Q6P996 788 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 RRAGAQ7L523 313 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 SMCR8Q8TEV9 937 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 STAMQ92783 540 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZCCHC17Q9NP64 241 aaKnown RBP11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 C1orf112Q9NSG2 853 aa11.05□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZEB2O60315 1214 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 MYBL1P10243 752 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 PTPRAP18433 802 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 ICAM3P32942 547 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 CATSPER3Q86XQ3 398 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 CEP170P1Q96L14 293 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 PDCD2LQ9BRP1 358 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZNF302Q9NR11 478 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 BLOC1S4Q9NUP1 217 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 MYO5AQ9Y4I1 1855 aaKnown RBP11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 FRMD3A2A2Y4 597 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 THAP12O43422 761 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 KLRC4O43908 158 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 PRLRP16471 622 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 MAPK8IP2Q13387 824 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 FAM102BQ5T8I3 360 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 ANKRD40Q6AI12 368 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 TYW1BQ6NUM6 668 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZNF677Q86XU0 584 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms