RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 DNM2P50570 870 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 CASP5P51878 434 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 FKBP3Q00688 224 aaKnown RBP16.16■□□□□ 0.18
MKS1-211ENST00000581761 CAP1Q01518 475 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 TRIM14Q14142 442 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 UGCGQ16739 394 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 PADI6Q6TGC4 694 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 EPM2AIP1Q7L775 607 aaPredicted RBP16.16■□□□□ 0.18
MKS1-211ENST00000581761 ZNF507Q8TCN5 953 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 CPLX3Q8WVH0 158 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 CEP63Q96MT8 703 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 KCTD10Q9H3F6 313 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 TMX1Q9H3N1 280 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 PARVGQ9HBI0 331 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 SEL1LQ9UBV2 794 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 PNMA3Q9UL41 463 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 ODF2LQ9ULJ1 636 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 ADGRA2Q96PE1 1338 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 LOXHD1Q8IVV2 1947 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 SOWAHBA6NEL2 793 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 SFI1A8K8P3 1242 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 CALUO43852 315 aaPredicted RBP16.15■□□□□ 0.18
MKS1-211ENST00000581761 MFAP3LO75121 409 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 HIP1RO75146 1068 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 EIF3JO75822 258 aaKnown RBP16.15■□□□□ 0.18
MKS1-211ENST00000581761 KCNJ6P48051 423 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 MAN2A1Q16706 1144 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 BMT2Q1RMZ1 405 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 CCDC40Q4G0X9 1142 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 FKBP15Q5T1M5 1219 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 CEP135Q66GS9 1140 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 C4orf19Q8IY42 314 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 SMAP1Q8IYB5 467 aaPredicted RBP16.15■□□□□ 0.18
MKS1-211ENST00000581761 GTF3C2Q8WUA4 911 aaPredicted RBP16.15■□□□□ 0.18
MKS1-211ENST00000581761 BAG1Q99933 345 aaPredicted RBP16.15■□□□□ 0.18
MKS1-211ENST00000581761 BCAS3Q9H6U6 928 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 JPH1Q9HDC5 661 aaPredicted RBP16.15■□□□□ 0.18
MKS1-211ENST00000581761 TXNRD2Q9NNW7 524 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 OLFML3Q9NRN5 406 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 RBPJLQ9UBG7 517 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 SLC9A2Q9UBY0 812 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 PCDHA10Q9Y5I2 948 aa16.15■□□□□ 0.18
MKS1-211ENST00000581761 TLR2O60603 784 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 DKC1O60832 514 aaKnown RBP eCLIP16.14■□□□□ 0.17
MKS1-211ENST00000581761 GNA14O95837 355 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 PSAPP07602 524 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 NMT1P30419 496 aaKnown RBP16.14■□□□□ 0.17
MKS1-211ENST00000581761 CASP14P31944 242 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 YWHABP31946 246 aaKnown RBP16.14■□□□□ 0.17
MKS1-211ENST00000581761 ICAM3P32942 547 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 RARRES1P49788 294 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 ZNF131P52739 623 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 KNOP1Q1ED39 458 aaKnown RBP16.14■□□□□ 0.17
MKS1-211ENST00000581761 EDRF1Q3B7T1 1238 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 VWA3BQ502W6 1294 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 SEPT14Q6ZU15 432 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.14■□□□□ 0.17
MKS1-211ENST00000581761 CTU1Q7Z7A3 348 aaKnown RBP16.14■□□□□ 0.17
MKS1-211ENST00000581761 TMEM139Q8IV31 216 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 CNGA4Q8IV77 575 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 FAM133AQ8N9E0 248 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 CCDC51Q96ER9 411 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 PANX2Q96RD6 677 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 MMP19Q99542 508 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 ZFYVE28Q9HCC9 887 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 ANKEF1Q9NU02 776 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 SLC45A1Q9Y2W3 748 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 ASTN1O14525 1302 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 UBE4BO95155 1302 aa16.14■□□□□ 0.17
MKS1-211ENST00000581761 BACH1O14867 736 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 CETN3O15182 167 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 EIF3DO15371 548 aaKnown RBP eCLIP16.13■□□□□ 0.17
MKS1-211ENST00000581761 ARHGAP6O43182 974 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 SORBS3O60504 671 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 USO1O60763 962 aaKnown RBP16.13■□□□□ 0.17
MKS1-211ENST00000581761 FKTNO75072 461 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 GYPCP04921 128 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 SP4Q02446 784 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 TBC1D8BQ0IIM8 1120 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 Q3C1V9 767 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 XKR9Q5GH70 373 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 MIIPQ5JXC2 388 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 WDR78Q5VTH9 848 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 MIS18BP1Q6P0N0 1132 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 C17orf99Q6UX52 265 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 STXBP4Q6ZWJ1 553 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 FAM178BQ8IXR5 827 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 ZC3H3Q8IXZ2 948 aaKnown RBP16.13■□□□□ 0.17
MKS1-211ENST00000581761 CCAR2Q8N163 923 aaKnown RBP16.13■□□□□ 0.17
MKS1-211ENST00000581761 PCMTD1Q96MG8 357 aaPredicted RBP16.13■□□□□ 0.17
MKS1-211ENST00000581761 MPHOSPH6Q99547 160 aaKnown RBP16.13■□□□□ 0.17
MKS1-211ENST00000581761 KCND1Q9NSA2 647 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 TYW1Q9NV66 732 aaKnown RBP16.13■□□□□ 0.17
MKS1-211ENST00000581761 GABBR1Q9UBS5 961 aa16.13■□□□□ 0.17
MKS1-211ENST00000581761 KIAA1217Q5T5P2 1943 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 USP27XA6NNY8 438 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 PDXKO00764 312 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 EDNRBP24530 442 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 HOXD13P35453 343 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms