RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CBX8Q9HC52 389 aa15.38■□□□□ 0.05
CDK5RAP3-219ENST00000580670 NRBP1Q9UHY1 535 aa15.38■□□□□ 0.05
CDK5RAP3-219ENST00000580670 DACH1Q9UI36 760 aa15.38■□□□□ 0.05
CDK5RAP3-219ENST00000580670 TSKSQ9UJT2 592 aa15.38■□□□□ 0.05
CDK5RAP3-219ENST00000580670 FAM184BQ9ULE4 1060 aa15.38■□□□□ 0.05
CDK5RAP3-219ENST00000580670 OATP04181 439 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 TPM2P07951 284 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 NPEPPSP55786 919 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 COASYQ13057 564 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ARHGEF6Q15052 776 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 GLIPR1L2Q4G1C9 344 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 TRIM50Q86XT4 487 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 TRPV1Q8NER1 839 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 CEP170P1Q96L14 293 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ZHX3Q9H4I2 956 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 GNEQ9Y223 722 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 GDAQ9Y2T3 454 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 EMSYQ7Z589 1322 aa15.37■□□□□ 0.05
CDK5RAP3-219ENST00000580670 DYNC1LI2O43237 492 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 USO1O60763 962 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 TBCAO75347 108 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 CYBAP13498 195 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 HS1BP3Q53T59 392 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PLPPR4Q7Z2D5 763 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 HPS3Q969F9 1004 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 LENG1Q96BZ8 264 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 GTPBP4Q9BZE4 634 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 SMARCAD1Q9H4L7 1026 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 FRMD3A2A2Y4 597 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 RSPH10B2B2RC85 870 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ADCY3O60266 1144 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 RSPH10BP0C881 870 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 AKR1A1P14550 325 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ELNP15502 786 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 GUCY2CP25092 1073 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 MARK3P27448 753 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 STK4Q13043 487 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PSMD2Q13200 908 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 HERC4Q5GLZ8 1057 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 TLK2Q86UE8 772 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 LUZP1Q86V48 1076 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 RAET1EQ8TD07 263 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 FAM167AQ96KS9 214 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 BPIFA3Q9BQP9 254 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 POLD4Q9HCU8 107 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 SLC39A2Q9NP94 309 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 CYP26B1Q9NR63 512 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 NRBP2Q9NSY0 501 aa15.36■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PPP1R3GB7ZBB8 358 aa15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PPFIA4O75335 1185 aa15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 FAM13AO94988 1023 aa15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 LGALS2P05162 132 aa15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 CD44P16070 742 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 EHHADHQ08426 723 aa15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 TRIM32Q13049 653 aa15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 MTERF2Q49AM1 385 aa15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 KLHL10Q6JEL2 608 aa15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 NIFKQ9BYG3 293 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ODF2LQ9ULJ1 636 aa15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 COL4A3BPQ9Y5P4 624 aa15.35■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PCNTO95613 3336 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 HIP1RO75146 1068 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 MMP3P08254 477 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PRCPP42785 496 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 SLC26A2P50443 739 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 TERF1P54274 439 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 CACNB2Q08289 660 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 HSP90AA2PQ14568 343 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 IQCB1Q15051 598 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 DGKDQ16760 1214 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 FAM26FQ5R3K3 315 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 MAEAQ7L5Y9 396 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 SFR1Q86XK3 245 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 AOPEPQ8N6M6 819 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 KIAA0895Q8NCT3 520 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 BBXQ8WY36 941 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 AP5M1Q9H0R1 490 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ERAP1Q9NZ08 941 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 TBC1D7Q9P0N9 293 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 MAPK8IP1Q9UQF2 711 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 Q9Y3F1 56 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ARID2Q68CP9 1835 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 SFI1A8K8P3 1242 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 BECN2A8MW95 431 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 HMGCRP04035 888 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ZNF286BP0CG31 522 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 GAP43P17677 238 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 CNGA1P29973 690 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 STIM1Q13586 685 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PLCB4Q15147 1175 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 CT47A1Q5JQC4 288 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ZSCAN30Q86W11 494 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 DHX40Q8IX18 779 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ATP8B4Q8TF62 1192 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 TIPINQ9BVW5 301 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PARVGQ9HBI0 331 aa15.34■□□□□ 0.05
CDK5RAP3-219ENST00000580670 A6NJR5 290 aa15.33■□□□□ 0.04
CDK5RAP3-219ENST00000580670 DGAT1O75907 488 aa15.33■□□□□ 0.04
CDK5RAP3-219ENST00000580670 HOXD8P13378 290 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms