RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 IER5Q5VY09 327 aa26.9■■□□□ 1.9
LIMD2-207ENST00000579329 NME8Q8N427 588 aa26.9■■□□□ 1.9
LIMD2-207ENST00000579329 DBF4BQ8NFT6 615 aa26.9■■□□□ 1.9
LIMD2-207ENST00000579329 PBX4Q9BYU1 374 aa26.9■■□□□ 1.9
LIMD2-207ENST00000579329 NOL7Q9UMY1 257 aaKnown RBP26.9■■□□□ 1.9
LIMD2-207ENST00000579329 TMEM265A0A087WTH1 108 aa26.89■■□□□ 1.9
LIMD2-207ENST00000579329 C22orf31O95567 290 aa26.89■■□□□ 1.9
LIMD2-207ENST00000579329 U2AF2P26368 475 aaKnown RBP eCLIP26.89■■□□□ 1.9
LIMD2-207ENST00000579329 MCM7P33993 719 aa26.89■■□□□ 1.9
LIMD2-207ENST00000579329 WDR5P61964 334 aaKnown RBP26.89■■□□□ 1.9
LIMD2-207ENST00000579329 PSMC5P62195 406 aa26.89■■□□□ 1.9
LIMD2-207ENST00000579329 EPHA7Q15375 998 aa26.89■■□□□ 1.9
LIMD2-207ENST00000579329 TCTN1Q2MV58 587 aa26.89■■□□□ 1.9
LIMD2-207ENST00000579329 XKR3Q5GH77 459 aa26.89■■□□□ 1.9
LIMD2-207ENST00000579329 NCAPH2Q6IBW4 605 aa26.89■■□□□ 1.9
LIMD2-207ENST00000579329 BANK1Q8NDB2 785 aa26.89■■□□□ 1.9
LIMD2-207ENST00000579329 PHOSPHO2Q8TCD6 241 aa26.89■■□□□ 1.9
LIMD2-207ENST00000579329 TRPV2Q9Y5S1 764 aa26.89■■□□□ 1.9
LIMD2-207ENST00000579329 TTC28Q96AY4 2481 aa26.89■■□□□ 1.89
LIMD2-207ENST00000579329 MAGEB2O15479 319 aa26.88■■□□□ 1.89
LIMD2-207ENST00000579329 DKC1O60832 514 aaKnown RBP eCLIP26.88■■□□□ 1.89
LIMD2-207ENST00000579329 TRAPPC10P48553 1259 aa26.88■■□□□ 1.89
LIMD2-207ENST00000579329 SPIRE1Q08AE8 756 aa26.88■■□□□ 1.89
LIMD2-207ENST00000579329 SEPT9Q9UHD8 586 aaPredicted RBP26.88■■□□□ 1.89
LIMD2-207ENST00000579329 MSRAQ9UJ68 235 aa26.88■■□□□ 1.89
LIMD2-207ENST00000579329 PCDHA12Q9UN75 941 aa26.88■■□□□ 1.89
LIMD2-207ENST00000579329 P4HBP07237 508 aaKnown RBP26.87■■□□□ 1.89
LIMD2-207ENST00000579329 GHRP10912 638 aa26.87■■□□□ 1.89
LIMD2-207ENST00000579329 PBX2P40425 430 aa26.87■■□□□ 1.89
LIMD2-207ENST00000579329 QARSP47897 775 aaKnown RBP26.87■■□□□ 1.89
LIMD2-207ENST00000579329 CUL4AQ13619 759 aa26.87■■□□□ 1.89
LIMD2-207ENST00000579329 TTC38Q5R3I4 469 aa26.87■■□□□ 1.89
LIMD2-207ENST00000579329 APBB2Q92870 758 aa26.87■■□□□ 1.89
LIMD2-207ENST00000579329 TIFAQ96CG3 184 aa26.87■■□□□ 1.89
LIMD2-207ENST00000579329 MTMR9Q96QG7 549 aa26.87■■□□□ 1.89
LIMD2-207ENST00000579329 OSBPL7Q9BZF2 842 aa26.87■■□□□ 1.89
LIMD2-207ENST00000579329 SIP14410 1827 aa26.86■■□□□ 1.89
LIMD2-207ENST00000579329 H3BQV1 296 aa26.86■■□□□ 1.89
LIMD2-207ENST00000579329 TXKP42681 527 aa26.86■■□□□ 1.89
LIMD2-207ENST00000579329 FBXO47Q5MNV8 452 aa26.86■■□□□ 1.89
LIMD2-207ENST00000579329 KIAA0319LQ8IZA0 1049 aa26.86■■□□□ 1.89
LIMD2-207ENST00000579329 NIFKQ9BYG3 293 aaKnown RBP26.86■■□□□ 1.89
LIMD2-207ENST00000579329 IFIH1Q9BYX4 1025 aaKnown RBP26.86■■□□□ 1.89
LIMD2-207ENST00000579329 TMEM60Q9H2L4 133 aa26.86■■□□□ 1.89
LIMD2-207ENST00000579329 TTC12Q9H892 705 aaPredicted RBP26.86■■□□□ 1.89
LIMD2-207ENST00000579329 PCDHA11Q9Y5I1 949 aa26.86■■□□□ 1.89
LIMD2-207ENST00000579329 STBD1O95210 358 aa26.85■■□□□ 1.89
LIMD2-207ENST00000579329 FOSL2P15408 326 aa26.85■■□□□ 1.89
LIMD2-207ENST00000579329 TMEM62Q0P6H9 643 aa26.85■■□□□ 1.89
LIMD2-207ENST00000579329 LPIN1Q14693 890 aa26.85■■□□□ 1.89
LIMD2-207ENST00000579329 ZNF174Q15697 407 aa26.85■■□□□ 1.89
LIMD2-207ENST00000579329 MCTP1Q6DN14 999 aa26.85■■□□□ 1.89
LIMD2-207ENST00000579329 METTL13Q8N6R0 699 aa26.85■■□□□ 1.89
LIMD2-207ENST00000579329 CELF4Q9BZC1 486 aaKnown RBP26.85■■□□□ 1.89
LIMD2-207ENST00000579329 SQORQ9Y6N5 450 aa26.85■■□□□ 1.89
LIMD2-207ENST00000579329 KDM3AQ9Y4C1 1321 aa26.85■■□□□ 1.89
LIMD2-207ENST00000579329 RABGGTBP53611 331 aa26.84■■□□□ 1.89
LIMD2-207ENST00000579329 TBC1D8BQ0IIM8 1120 aa26.84■■□□□ 1.89
LIMD2-207ENST00000579329 TARBP2Q15633 366 aaKnown RBP26.84■■□□□ 1.89
LIMD2-207ENST00000579329 MTERF2Q49AM1 385 aa26.84■■□□□ 1.89
LIMD2-207ENST00000579329 TSHZ1Q6ZSZ6 1077 aa26.84■■□□□ 1.89
LIMD2-207ENST00000579329 HERC6Q8IVU3 1022 aa26.84■■□□□ 1.89
LIMD2-207ENST00000579329 USP38Q8NB14 1042 aa26.84■■□□□ 1.89
LIMD2-207ENST00000579329 LXNQ9BS40 222 aa26.84■■□□□ 1.89
LIMD2-207ENST00000579329 MYO9BQ13459 2157 aa26.84■■□□□ 1.89
LIMD2-207ENST00000579329 DDX11L8A8MPP1 907 aa26.83■■□□□ 1.89
LIMD2-207ENST00000579329 TMOD1P28289 359 aa26.83■■□□□ 1.89
LIMD2-207ENST00000579329 DEFB103AP81534 67 aa26.83■■□□□ 1.89
LIMD2-207ENST00000579329 MKRN4PQ13434 485 aaPredicted RBP26.83■■□□□ 1.89
LIMD2-207ENST00000579329 EFCAB12Q6NXP0 572 aa26.83■■□□□ 1.89
LIMD2-207ENST00000579329 DYDC2Q96IM9 177 aa26.83■■□□□ 1.89
LIMD2-207ENST00000579329 MAP7D2Q96T17 732 aa26.83■■□□□ 1.89
LIMD2-207ENST00000579329 YBX2Q9Y2T7 364 aaKnown RBP26.83■■□□□ 1.89
LIMD2-207ENST00000579329 RBAK-RBAKDNI3L0D1 243 aa26.82■■□□□ 1.88
LIMD2-207ENST00000579329 AMHP03971 560 aa26.82■■□□□ 1.88
LIMD2-207ENST00000579329 OR52Z1P0C646 297 aa26.82■■□□□ 1.88
LIMD2-207ENST00000579329 CLCN3P51790 818 aa26.82■■□□□ 1.88
LIMD2-207ENST00000579329 LARP1BQ659C4 914 aaKnown RBP26.82■■□□□ 1.88
LIMD2-207ENST00000579329 C4orf19Q8IY42 314 aa26.82■■□□□ 1.88
LIMD2-207ENST00000579329 LINC01465Q8N7H1 131 aa26.82■■□□□ 1.88
LIMD2-207ENST00000579329 NEK9Q8TD19 979 aa26.82■■□□□ 1.88
LIMD2-207ENST00000579329 NKX2-4Q9H2Z4 354 aa26.82■■□□□ 1.88
LIMD2-207ENST00000579329 RGL1Q9NZL6 768 aa26.82■■□□□ 1.88
LIMD2-207ENST00000579329 GBF1Q92538 1859 aa26.82■■□□□ 1.88
LIMD2-207ENST00000579329 MICAL3Q7RTP6 2002 aa26.82■■□□□ 1.88
LIMD2-207ENST00000579329 TMEM150BA6NC51 233 aa26.81■■□□□ 1.88
LIMD2-207ENST00000579329 ANO5Q75V66 913 aa26.81■■□□□ 1.88
LIMD2-207ENST00000579329 LRRC71Q8N4P6 559 aa26.81■■□□□ 1.88
LIMD2-207ENST00000579329 EIF2AK1Q9BQI3 630 aaKnown RBP26.81■■□□□ 1.88
LIMD2-207ENST00000579329 ZSWIM4Q9H7M6 989 aa26.81■■□□□ 1.88
LIMD2-207ENST00000579329 WRAP73Q9P2S5 460 aaPredicted RBP26.81■■□□□ 1.88
LIMD2-207ENST00000579329 PTPRSQ13332 1948 aa26.8■■□□□ 1.88
LIMD2-207ENST00000579329 EVPLQ92817 2033 aa26.8■■□□□ 1.88
LIMD2-207ENST00000579329 K7ELQ4 463 aaPredicted RBP26.8■■□□□ 1.88
LIMD2-207ENST00000579329 CYP4A11Q02928 519 aa26.8■■□□□ 1.88
LIMD2-207ENST00000579329 CTTNQ14247 550 aaKnown RBP26.8■■□□□ 1.88
LIMD2-207ENST00000579329 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.8■■□□□ 1.88
LIMD2-207ENST00000579329 CEP89Q96ST8 783 aa26.8■■□□□ 1.88
LIMD2-207ENST00000579329 ZNF576Q9H609 170 aa26.8■■□□□ 1.88
LIMD2-207ENST00000579329 AGO3Q9H9G7 860 aaKnown RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms