RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 ZNF713Q8N859 430 aaPredicted RBP4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 PANK1Q8TE04 598 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 BRF1Q92994 677 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 APIPQ96GX9 242 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 HIC2Q96JB3 615 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 ACAP3Q96P50 834 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 COLEC11Q9BWP8 271 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 ZDHHC5Q9C0B5 715 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 PDGFDQ9GZP0 370 aaPredicted RBP4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 CCDC68Q9H2F9 335 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 IGFLR1Q9H665 355 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 GPR27Q9NS67 375 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 GIMAP2Q9UG22 337 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 SYNPO2Q9UMS6 1093 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 JAG2Q9Y219 1238 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 COQ6Q9Y2Z9 468 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 PCDHA11Q9Y5I1 949 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 SPO11Q9Y5K1 396 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 EIF4G3O43432 1585 aaKnown RBP4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 ARAP1Q96P48 1450 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 IFT140Q96RY7 1462 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 TOP2AP11388 1531 aaKnown RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 MASP2O00187 686 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 SOX1O00570 391 aaPredicted RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 SHOXO15266 292 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 HOXC11O43248 304 aaPredicted RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 NCK2O43639 380 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 DKC1O60832 514 aaKnown RBP eCLIP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 ZBED4O75132 1171 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 SKAP2O75563 359 aaPredicted RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 ALBP02768 609 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 PARP1P09874 1014 aaKnown RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 ZBTB48P10074 688 aaPredicted RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 MYCLP12524 364 aaPredicted RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 IDEP14735 1019 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 C5AR1P21730 350 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 HTR1BP28222 390 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 IL12RB1P42701 662 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 MTNR1BP49286 362 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 ETF1P62495 437 aaKnown RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 PLIN5Q00G26 463 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 INSM1Q01101 510 aaPredicted RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 ALDH6A1Q02252 535 aaKnown RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 CACNB2Q08289 660 aaPredicted RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 TBC1D8BQ0IIM8 1120 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 PLCB4Q15147 1175 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 SLC14A2Q15849 920 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 PGS1Q32NB8 556 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 ZC3H12AQ5D1E8 599 aaKnown RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 FAM47CQ5HY64 1035 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 HECTD3Q5T447 861 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 MFSD4BQ5TF39 518 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 DENND5AQ6IQ26 1287 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 PLBD1Q6P4A8 553 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 APOA5Q6Q788 366 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 TMCO3Q6UWJ1 677 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 HFE2Q6ZVN8 426 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 C16orf59Q7L2K0 433 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 MAEAQ7L5Y9 396 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 SIAH1Q8IUQ4 282 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 HSCBQ8IWL3 235 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 MICALL1Q8N3F8 863 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 SVOPQ8N4V2 548 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 C2orf69Q8N8R5 385 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 ZMIZ2Q8NF64 920 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 SYTL5Q8TDW5 730 aaPredicted RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 COA7Q96BR5 231 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 ASB2Q96Q27 587 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 LRFN3Q9BTN0 628 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 CCDC86Q9H6F5 360 aaKnown RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 DNAJC28Q9NX36 388 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 H2AFY2Q9P0M6 372 aaPredicted RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 ZNF112Q9UJU3 913 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 PPP1R9AQ9ULJ8 1098 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 MAGED2Q9UNF1 606 aaPredicted RBP4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 GPR34Q9UPC5 381 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 TRIM33Q9UPN9 1127 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 SNX5Q9Y5X3 404 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 GPR45Q9Y5Y3 372 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 FHOD1Q9Y613 1164 aa4.93□□□□□ -1.62
GAPLINC-201ENST00000578664 TOPBP1Q92547 1522 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 SYNDIG1LA6NDD5 238 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 GOLGA6L3A6NEY3 463 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 A6NLC8 198 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 FANCGO15287 622 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 ZNF862O60290 1169 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 DTNBO60941 627 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 NDUFS2O75306 463 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 HMMRO75330 724 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 INMTO95050 263 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 CPB1P15086 417 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 VEGFAP15692 232 aaPredicted RBP4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 PDIA3P30101 505 aaKnown RBP4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 ECI1P42126 302 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 AFF1P51825 1210 aaKnown RBP4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 MAPK10P53779 464 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 CABP4P57796 275 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 CYP4F3Q08477 520 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 NEXNQ0ZGT2 675 aa4.92□□□□□ -1.62
GAPLINC-201ENST00000578664 GRM1Q13255 1194 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms