RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 LYPLA2O95372 231 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 MUTP22033 750 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 NPEPPSP55786 919 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 FAM160A1Q05DH4 1040 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 PPFIA1Q13136 1202 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 MCM6Q14566 821 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 NBPF20Q3BBV1 942 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 OTUD6AQ7L8S5 288 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 NECAB2Q7Z6G3 386 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 IQUBQ8NA54 791 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 TRAPPC12Q8WVT3 735 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 RAD54LQ92698 747 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 CEP170P1Q96L14 293 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 BHMT2Q9H2M3 363 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 STK17AQ9UEE5 414 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 ARID2Q68CP9 1835 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 FAM237AA0A1B0GTK4 181 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 USO1O60763 962 aaKnown RBP13.53□□□□□ -0.24
IFT20-207ENST00000578547 NR1I2O75469 434 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 EYA4O95677 639 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 PLA2G4BP0C869 781 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 INSRRP14616 1297 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 RARRES1P49788 294 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 ATN1P54259 1190 aaPredicted RBP13.53□□□□□ -0.24
IFT20-207ENST00000578547 ITGA7Q13683 1181 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 GRIK4Q16099 956 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 E2F4Q16254 413 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 SLC39A5Q6ZMH5 540 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 CEP57L1Q8IYX8 460 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 FMR1NBQ8N0W7 255 aaPredicted RBP13.53□□□□□ -0.24
IFT20-207ENST00000578547 SLC43A3Q8NBI5 491 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 ZBTB10Q96DT7 871 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 PYM1Q9BRP8 204 aaKnown RBP13.53□□□□□ -0.24
IFT20-207ENST00000578547 CYP26B1Q9NR63 512 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 ANKEF1Q9NU02 776 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 BLOC1S4Q9NUP1 217 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 SETD4Q9NVD3 440 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 SERTAD1Q9UHV2 236 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 DBR1Q9UK59 544 aaKnown RBP13.53□□□□□ -0.24
IFT20-207ENST00000578547 BRCA2P51587 3418 aa13.53□□□□□ -0.24
IFT20-207ENST00000578547 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.25
IFT20-207ENST00000578547 ZNF202O95125 648 aa13.52□□□□□ -0.25
IFT20-207ENST00000578547 CDK7P50613 346 aa13.52□□□□□ -0.25
IFT20-207ENST00000578547 POLGP54098 1239 aaPredicted RBP13.52□□□□□ -0.25
IFT20-207ENST00000578547 LONRF3Q496Y0 759 aa13.52□□□□□ -0.25
IFT20-207ENST00000578547 NAALADL2Q58DX5 795 aa13.52□□□□□ -0.25
IFT20-207ENST00000578547 LMBR1Q8WVP7 490 aa13.52□□□□□ -0.25
IFT20-207ENST00000578547 LARP4BQ92615 738 aaKnown RBP13.52□□□□□ -0.25
IFT20-207ENST00000578547 STAMQ92783 540 aa13.52□□□□□ -0.25
IFT20-207ENST00000578547 NIFKQ9BYG3 293 aaKnown RBP13.52□□□□□ -0.25
IFT20-207ENST00000578547 DACT1Q9NYF0 836 aa13.52□□□□□ -0.25
IFT20-207ENST00000578547 HDAC6Q9UBN7 1215 aa13.52□□□□□ -0.25
IFT20-207ENST00000578547 SCN10AQ9Y5Y9 1956 aa13.52□□□□□ -0.25
IFT20-207ENST00000578547 COL1A2P08123 1366 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 C17orf102A2RUQ5 167 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 ZBTB42B2RXF5 422 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 ARVCFO00192 962 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 ACTN4O43707 911 aaKnown RBP13.51□□□□□ -0.25
IFT20-207ENST00000578547 KINO60870 393 aaKnown RBP13.51□□□□□ -0.25
IFT20-207ENST00000578547 XRCC6P12956 609 aaKnown RBP eCLIP13.51□□□□□ -0.25
IFT20-207ENST00000578547 AFMP43652 599 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 SLC12A3P55017 1021 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 ZNF200P98182 395 aaPredicted RBP13.51□□□□□ -0.25
IFT20-207ENST00000578547 RAD51AP2Q09MP3 1159 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 TBC1D8BQ0IIM8 1120 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 HIC1Q14526 733 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 LRRC26Q2I0M4 334 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 ZNF484Q5JVG2 852 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 NFRKBQ6P4R8 1299 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 PADI6Q6TGC4 694 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 SV2BQ7L1I2 683 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 GPBP1Q86WP2 473 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 GRAMD1CQ8IYS0 662 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 KCTD17Q8N5Z5 321 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 CNNM3Q8NE01 707 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 ENGASEQ8NFI3 743 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 GPT2Q8TD30 523 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 CUEDC2Q9H467 287 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 GTF2IRD1Q9UHL9 959 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 TUBE1Q9UJT0 475 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 LOXHD1Q8IVV2 1947 aa13.51□□□□□ -0.25
IFT20-207ENST00000578547 NRCAMQ92823 1304 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 RRN3P2A6NIE6 340 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 CAPN15O75808 1086 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 KRT18P05783 430 aaKnown RBP13.5□□□□□ -0.25
IFT20-207ENST00000578547 SLFN14P0C7P3 912 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 KLRC1P26715 233 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
IFT20-207ENST00000578547 SNW1Q13573 536 aaKnown RBP13.5□□□□□ -0.25
IFT20-207ENST00000578547 EMC2Q15006 297 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 SNX17Q15036 470 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 TARBP2Q15633 366 aaKnown RBP13.5□□□□□ -0.25
IFT20-207ENST00000578547 C1orf53Q5VUE5 145 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 GDF6Q6KF10 455 aaPredicted RBP13.5□□□□□ -0.25
IFT20-207ENST00000578547 KRBA2Q6ZNG9 492 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 MAEAQ7L5Y9 396 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 LRRC71Q8N4P6 559 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 METTL13Q8N6R0 699 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 SYT2Q8N9I0 419 aaPredicted RBP13.5□□□□□ -0.25
IFT20-207ENST00000578547 SLC7A3Q8WY07 619 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms