RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 PPP2R5CQ13362 524 aa15.38■□□□□ 0.05
CSNK1D-208ENST00000578501 IKBKEQ14164 716 aa15.38■□□□□ 0.05
CSNK1D-208ENST00000578501 MTHFD1LQ6UB35 978 aa15.38■□□□□ 0.05
CSNK1D-208ENST00000578501 CKAP2LQ8IYA6 745 aa15.38■□□□□ 0.05
CSNK1D-208ENST00000578501 FBXO18Q8NFZ0 1043 aa15.38■□□□□ 0.05
CSNK1D-208ENST00000578501 DNAJB3Q8WWF6 145 aa15.38■□□□□ 0.05
CSNK1D-208ENST00000578501 GJA10Q969M2 543 aa15.38■□□□□ 0.05
CSNK1D-208ENST00000578501 EPHX3Q9H6B9 360 aa15.38■□□□□ 0.05
CSNK1D-208ENST00000578501 CEP131Q9UPN4 1083 aa15.38■□□□□ 0.05
CSNK1D-208ENST00000578501 BDP1A6H8Y1 2624 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 TET1Q8NFU7 2136 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 FAM205CA6NFA0 338 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 CHMP2AO43633 222 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 GPR37L1O60883 481 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 CTSHP09668 335 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 KLRC1P26715 233 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 KCNQ1P51787 676 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 WDR5P61964 334 aaKnown RBP15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 IER5Q5VY09 327 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 MIER3Q7Z3K6 550 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 SLFN12Q8IYM2 578 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 FAM184AQ8NB25 1140 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 DBF4BQ8NFT6 615 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 TRAPPC12Q8WVT3 735 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 SEPT8Q92599 483 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 APBB2Q92870 758 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 TMX3Q96JJ7 454 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 FOXP1Q9H334 677 aaPredicted RBP15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 NRBP2Q9NSY0 501 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 VAV3Q9UKW4 847 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 GTF3C3Q9Y5Q9 886 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 SQORQ9Y6N5 450 aa15.37■□□□□ 0.05
CSNK1D-208ENST00000578501 ZNF862O60290 1169 aa15.36■□□□□ 0.05
CSNK1D-208ENST00000578501 OATP04181 439 aa15.36■□□□□ 0.05
CSNK1D-208ENST00000578501 KCNJ6P48051 423 aa15.36■□□□□ 0.05
CSNK1D-208ENST00000578501 MRPS6P82932 125 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-208ENST00000578501 TCTN1Q2MV58 587 aa15.36■□□□□ 0.05
CSNK1D-208ENST00000578501 FAM43BQ6ZT52 329 aaPredicted RBP15.36■□□□□ 0.05
CSNK1D-208ENST00000578501 HERC6Q8IVU3 1022 aa15.36■□□□□ 0.05
CSNK1D-208ENST00000578501 HAS1Q92839 578 aa15.36■□□□□ 0.05
CSNK1D-208ENST00000578501 TCF20Q9UGU0 1960 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 M0QZ92 97 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 MAGEB2O15479 319 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 CD2BP2O95400 341 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 BAG4O95429 457 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 C22orf31O95567 290 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 FOSBP53539 338 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 PRKCEQ02156 737 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 UGCGQ16739 394 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 POTEDQ86YR6 584 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 KIAA0319LQ8IZA0 1049 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 ZBTB10Q96DT7 871 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 NIFKQ9BYG3 293 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 IFIH1Q9BYX4 1025 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 FAM49AQ9H0Q0 323 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 KIF3AQ9Y496 699 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 CDY2AQ9Y6F7 541 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 KDM3AQ9Y4C1 1321 aa15.35■□□□□ 0.05
CSNK1D-208ENST00000578501 KIF28PB7ZC32 967 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 MARCH6O60337 910 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 RABGGTBP53611 331 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 PSMC5P62195 406 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 GUCY1B3Q02153 619 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 LPIN1Q14693 890 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 FBXO47Q5MNV8 452 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 TSHZ1Q6ZSZ6 1077 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 ZNF710Q8N1W2 664 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 CELF4Q9BZC1 486 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 OSBPL7Q9BZF2 842 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 TRPV2Q9Y5S1 764 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 MTCH2Q9Y6C9 303 aa15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 MYH9P35579 1960 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-208ENST00000578501 EML1O00423 815 aa15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 TLL1O43897 1013 aa15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 NEMFO60524 1076 aa15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 DKC1O60832 514 aaKnown RBP eCLIP15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 STBD1O95210 358 aa15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 U2AF2P26368 475 aaKnown RBP eCLIP15.33■□□□□ 0.049e-13■■■■■ 29.8
CSNK1D-208ENST00000578501 QARSP47897 775 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 DEFB103AP81534 67 aa15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 SPIRE1Q08AE8 756 aa15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 ORC2Q13416 577 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 EPHA7Q15375 998 aa15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 TARBP2Q15633 366 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 CALCRLQ16602 461 aa15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 XKR3Q5GH77 459 aa15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 HLA-CQ95604 372 aa15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 MTMR9Q96QG7 549 aa15.33■□□□□ 0.04
CSNK1D-208ENST00000578501 WNT7AO00755 349 aa15.32■□□□□ 0.04
CSNK1D-208ENST00000578501 GJB5O95377 273 aa15.32■□□□□ 0.04
CSNK1D-208ENST00000578501 AMHP03971 560 aa15.32■□□□□ 0.04
CSNK1D-208ENST00000578501 P4HBP07237 508 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-208ENST00000578501 GHRP10912 638 aa15.32■□□□□ 0.04
CSNK1D-208ENST00000578501 TMOD1P28289 359 aa15.32■□□□□ 0.04
CSNK1D-208ENST00000578501 TRAPPC10P48553 1259 aa15.32■□□□□ 0.04
CSNK1D-208ENST00000578501 TRMT1LQ7Z2T5 733 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-208ENST00000578501 NOSTRINQ8IVI9 506 aa15.32■□□□□ 0.04
CSNK1D-208ENST00000578501 LINC01465Q8N7H1 131 aa15.32■□□□□ 0.04
CSNK1D-208ENST00000578501 PCDHA12Q9UN75 941 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms