RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 STAT5BP51692 787 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 GNASQ5JWF2 1037 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 SPECC1Q5M775 1068 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 SWSAP1Q6NVH7 229 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 PDXDC2PQ6P474 469 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 CATSPER3Q86XQ3 398 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 CCDC60Q8IWA6 550 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 C4orf19Q8IY42 314 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 KLHDC9Q8NEP7 349 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 GLG1Q92896 1179 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 EPSTI1Q96J88 318 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 FAM167AQ96KS9 214 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 NACC1Q96RE7 527 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 LXNQ9BS40 222 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 TSEN34Q9BSV6 310 aaKnown RBP12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 KATNAL1Q9BW62 490 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 MCOLN1Q9GZU1 580 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 CUEDC2Q9H467 287 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 LMBRD1Q9NUN5 540 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 ERAP1Q9NZ08 941 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 GABBR1Q9UBS5 961 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 USP25Q9UHP3 1055 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 HPSEQ9Y251 543 aa12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 MAFBQ9Y5Q3 323 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC8-204ENST00000578252 MOXD2PA6NHM9 499 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 CTAGE5O15320 804 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 MED24O75448 989 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 CABYRO75952 493 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 SLITRK3O94933 977 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 MBD3O95983 291 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 PGK1P00558 417 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 LGALS2P05162 132 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 GJB1P08034 283 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 SPATA31C1P0DKV0 1188 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 XRCC6P12956 609 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 PFKFB1P16118 471 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 CDC25AP30304 524 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 CYP4A11Q02928 519 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 MTFR1Q15390 333 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 TMEM119Q4V9L6 283 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 XKR3Q5GH77 459 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 UTP14CQ5TAP6 766 aaKnown RBP12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 RRAGBQ5VZM2 374 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 USP49Q70CQ1 688 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 TPH2Q8IWU9 490 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 IQUBQ8NA54 791 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 BANK1Q8NDB2 785 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 CCDC34Q96HJ3 373 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 MAGEF1Q9HAY2 307 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 RGL1Q9NZL6 768 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 STK17AQ9UEE5 414 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 KCNH3Q9ULD8 1083 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 ARID2Q68CP9 1835 aa12.51□□□□□ -0.41
TRAPPC8-204ENST00000578252 A0A1B0GVL5 298 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 KBTBD13C9JR72 458 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 H3BRB1 525 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 GADD45BO75293 160 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 F2P00734 622 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 MYL3P08590 195 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 PLCG1P19174 1290 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 PTGS1P23219 599 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 STAT6P42226 847 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 SYKP43405 635 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 PURAQ00577 322 aaKnown RBP12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 BEX3Q00994 111 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 PRKCEQ02156 737 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 FAM160A1Q05DH4 1040 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 GRB10Q13322 594 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 CTTNQ14247 550 aaKnown RBP12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 KARSQ15046 597 aaKnown RBP12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 LRRC41Q15345 812 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 ZRSR1Q15695 479 aaKnown RBP12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 CKAP2LQ8IYA6 745 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 DEFB118Q96PH6 123 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 PCYT2Q99447 389 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 C16orf70Q9BSU1 422 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 MTG1Q9BT17 334 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 TUT1Q9H6E5 874 aaKnown RBP12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 NRBP2Q9NSY0 501 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 ANKEF1Q9NU02 776 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 DDX19AQ9NUU7 478 aaKnown RBP12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 OGDHLQ9ULD0 1010 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 KIAA1024Q9UPX6 916 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 DNM3Q9UQ16 869 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 TELO2Q9Y4R8 837 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 PPME1Q9Y570 386 aa12.5□□□□□ -0.41
TRAPPC8-204ENST00000578252 MYADML2A6NDP7 307 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 DNM1LO00429 736 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 POLR2DO15514 142 aaKnown RBP12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 ZNF862O60290 1169 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 SGPL1O95470 568 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 OATP04181 439 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 ZNF286BP0CG31 522 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 NDUFA8P51970 172 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 KCNA10Q16322 511 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 UGCGQ16739 394 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 CCSAPQ6IQ19 270 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 ATP8B4Q8TF62 1192 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms