RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 CEP89Q96ST8 783 aa21.7■■□□□ 1.06
SS18-208ENST00000577751 FAM49AQ9H0Q0 323 aaPredicted RBP21.7■■□□□ 1.06
SS18-208ENST00000577751 WRAP73Q9P2S5 460 aaPredicted RBP21.7■■□□□ 1.06
SS18-208ENST00000577751 CDY2AQ9Y6F7 541 aa21.7■■□□□ 1.06
SS18-208ENST00000577751 RBAK-RBAKDNI3L0D1 243 aa21.69■■□□□ 1.06
SS18-208ENST00000577751 NBR1Q14596 966 aa21.69■■□□□ 1.06
SS18-208ENST00000577751 ANO5Q75V66 913 aa21.69■■□□□ 1.06
SS18-208ENST00000577751 C4orf19Q8IY42 314 aa21.69■■□□□ 1.06
SS18-208ENST00000577751 LINC01465Q8N7H1 131 aa21.69■■□□□ 1.06
SS18-208ENST00000577751 DBF4BQ8NFT6 615 aa21.69■■□□□ 1.06
SS18-208ENST00000577751 HSD17B14Q9BPX1 270 aa21.69■■□□□ 1.06
SS18-208ENST00000577751 RGL1Q9NZL6 768 aa21.69■■□□□ 1.06
SS18-208ENST00000577751 PCDHB6Q9Y5E3 794 aa21.69■■□□□ 1.06
SS18-208ENST00000577751 SLC4A7Q9Y6M7 1214 aa21.69■■□□□ 1.06
SS18-208ENST00000577751 LOXHD1Q8IVV2 1947 aa21.68■■□□□ 1.06
SS18-208ENST00000577751 ABHD14A-ACY1A0A1B0GW23 586 aa21.68■■□□□ 1.06
SS18-208ENST00000577751 ZBBXA8MT70 800 aa21.68■■□□□ 1.06
SS18-208ENST00000577751 SLITRK3O94933 977 aa21.68■■□□□ 1.06
SS18-208ENST00000577751 OR52Z1P0C646 297 aa21.68■■□□□ 1.06
SS18-208ENST00000577751 MKRN4PQ13434 485 aaPredicted RBP21.68■■□□□ 1.06
SS18-208ENST00000577751 RILPL1Q5EBL4 403 aa21.68■■□□□ 1.06
SS18-208ENST00000577751 DYDC2Q96IM9 177 aa21.68■■□□□ 1.06
SS18-208ENST00000577751 EIF2AK1Q9BQI3 630 aaKnown RBP21.68■■□□□ 1.06
SS18-208ENST00000577751 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.68■■□□□ 1.06
SS18-208ENST00000577751 SEPT9Q9UHD8 586 aaPredicted RBP21.68■■□□□ 1.06
SS18-208ENST00000577751 SQORQ9Y6N5 450 aa21.68■■□□□ 1.06
SS18-208ENST00000577751 KDM3AQ9Y4C1 1321 aa21.68■■□□□ 1.06
SS18-208ENST00000577751 PTPRSQ13332 1948 aa21.68■■□□□ 1.06
SS18-208ENST00000577751 GBF1Q92538 1859 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 TMEM150BA6NC51 233 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 DDX11L8A8MPP1 907 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 GRXCR1A8MXD5 290 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 PDCP20941 246 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 IKBKEQ14164 716 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 FBXO47Q5MNV8 452 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 EFCAB12Q6NXP0 572 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 PHOSPHO2Q8TCD6 241 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 NEK9Q8TD19 979 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 LXNQ9BS40 222 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 CELF4Q9BZC1 486 aaKnown RBP21.67■■□□□ 1.06
SS18-208ENST00000577751 ZSWIM4Q9H7M6 989 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 TRPV2Q9Y5S1 764 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 MICAL3Q7RTP6 2002 aa21.67■■□□□ 1.06
SS18-208ENST00000577751 IGKV6-21A0A0C4DH24 114 aa21.66■■□□□ 1.06
SS18-208ENST00000577751 EFCAB14O75071 495 aa21.66■■□□□ 1.06
SS18-208ENST00000577751 LYPLA2O95372 231 aa21.66■■□□□ 1.06
SS18-208ENST00000577751 WDR5P61964 334 aaKnown RBP21.66■■□□□ 1.06
SS18-208ENST00000577751 TMEM62Q0P6H9 643 aa21.66■■□□□ 1.06
SS18-208ENST00000577751 PTGDRQ13258 359 aa21.66■■□□□ 1.06
SS18-208ENST00000577751 CTTNQ14247 550 aaKnown RBP21.66■■□□□ 1.06
SS18-208ENST00000577751 LPIN1Q14693 890 aa21.66■■□□□ 1.06
SS18-208ENST00000577751 MTERF2Q49AM1 385 aa21.66■■□□□ 1.06
SS18-208ENST00000577751 SEPT8Q92599 483 aa21.66■■□□□ 1.06
SS18-208ENST00000577751 SLC9A7Q96T83 725 aa21.66■■□□□ 1.06
SS18-208ENST00000577751 POTEMA6NI47 508 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 M0QZ92 97 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 GHRP10912 638 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 ATP2A2P16615 1042 aaKnown RBP21.65■■□□□ 1.06
SS18-208ENST00000577751 SYT1P21579 422 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 TECP42680 631 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 CYP4A11Q02928 519 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 TBC1D8BQ0IIM8 1120 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 TSHZ1Q6ZSZ6 1077 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 HSCBQ8IWL3 235 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 METTL13Q8N6R0 699 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 USP38Q8NB14 1042 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 APBB2Q92870 758 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 SH2D3AQ9BRG2 576 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 PBX4Q9BYU1 374 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 IFIH1Q9BYX4 1025 aaKnown RBP21.65■■□□□ 1.06
SS18-208ENST00000577751 CYP26B1Q9NR63 512 aa21.65■■□□□ 1.06
SS18-208ENST00000577751 LAD1O00515 517 aa21.64■■□□□ 1.05
SS18-208ENST00000577751 MAFO75444 373 aaPredicted RBP21.64■■□□□ 1.05
SS18-208ENST00000577751 TMOD1P28289 359 aa21.64■■□□□ 1.05
SS18-208ENST00000577751 YWHABP31946 246 aaKnown RBP21.64■■□□□ 1.05
SS18-208ENST00000577751 FXR2P51116 673 aaKnown RBP eCLIP21.64■■□□□ 1.05
SS18-208ENST00000577751 CLCN3P51790 818 aa21.64■■□□□ 1.05
SS18-208ENST00000577751 TPH2Q8IWU9 490 aa21.64■■□□□ 1.05
SS18-208ENST00000577751 LRRC71Q8N4P6 559 aa21.64■■□□□ 1.05
SS18-208ENST00000577751 AGO3Q9H9G7 860 aaKnown RBP21.64■■□□□ 1.05
SS18-208ENST00000577751 CDHR5Q9HBB8 845 aa21.64■■□□□ 1.05
SS18-208ENST00000577751 PPME1Q9Y570 386 aa21.64■■□□□ 1.05
SS18-208ENST00000577751 ARID2Q68CP9 1835 aa21.64■■□□□ 1.05
SS18-208ENST00000577751 ZBTB39O15060 712 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 GPR32O75388 356 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 SPATA31C1P0DKV0 1188 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 DNAJB2P25686 324 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 PBX2P40425 430 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 PRPHP41219 470 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 KCNJ6P48051 423 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 NPEPPSP55786 919 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 DEFB103AP81534 67 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 PLA2G4FQ68DD2 849 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 OTUD6AQ7L8S5 288 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 BRAPQ7Z569 592 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 ZNF710Q8N1W2 664 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 ZNF579Q8NAF0 562 aaKnown RBP21.63■■□□□ 1.05
SS18-208ENST00000577751 SUGCTQ9HAC7 445 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 FOXD4L1Q9NU39 408 aa21.63■■□□□ 1.05
SS18-208ENST00000577751 TMEM265A0A087WTH1 108 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms