RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 PYM1Q9BRP8 204 aaKnown RBP11.43□□□□□ -0.58
SS18-207ENST00000577636 AMNQ9BXJ7 453 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 PCDHA6Q9UN73 950 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 PCDHA8Q9Y5H6 950 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 SRPRBQ9Y5M8 271 aaKnown RBP11.43□□□□□ -0.58
SS18-207ENST00000577636 ABCB11O95342 1321 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 LAD1O00515 517 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 DCXO43602 365 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 EIF3JO75822 258 aaKnown RBP11.42□□□□□ -0.58
SS18-207ENST00000577636 NR3C2P08235 984 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 PFKFB1P16118 471 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 TXLNAP40222 546 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 SYKP43405 635 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 RBL2Q08999 1139 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 HIC1Q14526 733 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 MBTPS1Q14703 1052 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 ZNF174Q15697 407 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 SLC35G1Q2M3R5 365 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 TRIM71Q2Q1W2 868 aaKnown RBP11.42□□□□□ -0.58
SS18-207ENST00000577636 PUS10Q3MIT2 529 aaKnown RBP11.42□□□□□ -0.58
SS18-207ENST00000577636 AXDND1Q5T1B0 1012 aaPredicted RBP11.42□□□□□ -0.58
SS18-207ENST00000577636 RESP18Q5W5W9 173 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 TRAF7Q6Q0C0 670 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 FBXO11Q86XK2 927 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 TEX2Q8IWB9 1127 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 FBXL18Q96ME1 805 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 TIGD1Q96MW7 591 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 GOLPH3LQ9H4A5 285 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 RIC8AQ9NPQ8 531 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 CLDND1Q9NY35 253 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 MRPL11Q9Y3B7 192 aaKnown RBP11.42□□□□□ -0.58
SS18-207ENST00000577636 PCDHA1Q9Y5I3 950 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 BDP1A6H8Y1 2624 aa11.42□□□□□ -0.58
SS18-207ENST00000577636 HAS3O00219 553 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 CTSHP09668 335 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 MCM7P33993 719 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 NDUFA8P51970 172 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 NPY5RQ15761 445 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 CLUL1Q15846 466 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 QRICH1Q2TAL8 776 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 ARL6IP4Q66PJ3 421 aaKnown RBP11.41□□□□□ -0.58
SS18-207ENST00000577636 KANK3Q6NY19 840 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 NEK8Q86SG6 692 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 GAS2L3Q86XJ1 694 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 TMEM192Q8IY95 271 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 FMR1NBQ8N0W7 255 aaPredicted RBP11.41□□□□□ -0.58
SS18-207ENST00000577636 ENGASEQ8NFI3 743 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 PPTC7Q8NI37 304 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 NEK9Q8TD19 979 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 ATP6V0A1Q93050 837 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 MTMR8Q96EF0 704 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 SPATA33Q96N06 139 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 PSTPIP2Q9H939 334 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 PXMP2Q9NR77 195 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 FBXO2Q9UK22 296 aaPredicted RBP11.41□□□□□ -0.58
SS18-207ENST00000577636 KCNH3Q9ULD8 1083 aa11.41□□□□□ -0.58
SS18-207ENST00000577636 TANC1Q9C0D5 1861 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 COL4A4P53420 1690 aaPredicted RBP11.4□□□□□ -0.58
SS18-207ENST00000577636 C17orf102A2RUQ5 167 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 H3BNC9 293 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 ZNF202O95125 648 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 GGPS1O95749 300 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 F2P00734 622 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 HTRA4P83105 476 aaPredicted RBP11.4□□□□□ -0.58
SS18-207ENST00000577636 ATP2C1P98194 919 aaPredicted RBP11.4□□□□□ -0.58
SS18-207ENST00000577636 NHLH1Q02575 133 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 PTGDRQ13258 359 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 SNW1Q13573 536 aaKnown RBP11.4□□□□□ -0.58
SS18-207ENST00000577636 INF2Q27J81 1249 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 HSDL1Q3SXM5 330 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 TIGD5Q53EQ6 642 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 TYW1BQ6NUM6 668 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 DTHD1Q6ZMT9 781 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 CKAP2LQ8IYA6 745 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 SEPT8Q92599 483 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 SAMD11Q96NU1 681 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 OSBPL7Q9BZF2 842 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 NAT10Q9H0A0 1025 aaKnown RBP11.4□□□□□ -0.58
SS18-207ENST00000577636 NSUN3Q9H649 340 aaKnown RBP11.4□□□□□ -0.58
SS18-207ENST00000577636 IGFLR1Q9H665 355 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 MLXIPQ9HAP2 919 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 FAM50BQ9Y247 325 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 PTPRSQ13332 1948 aa11.4□□□□□ -0.58
SS18-207ENST00000577636 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
SS18-207ENST00000577636 MYH15Q9Y2K3 1946 aa11.39□□□□□ -0.59
SS18-207ENST00000577636 FAM237AA0A1B0GTK4 181 aa11.39□□□□□ -0.59
SS18-207ENST00000577636 M0R2N6 131 aa11.39□□□□□ -0.59
SS18-207ENST00000577636 TREHO43280 583 aa11.39□□□□□ -0.59
SS18-207ENST00000577636 CCNT1O60563 726 aaKnown RBP11.39□□□□□ -0.59
SS18-207ENST00000577636 PPFIA4O75335 1185 aa11.39□□□□□ -0.59
SS18-207ENST00000577636 XRCC6P12956 609 aaKnown RBP eCLIP11.39□□□□□ -0.59
SS18-207ENST00000577636 LONP1P36776 959 aaKnown RBP11.39□□□□□ -0.59
SS18-207ENST00000577636 TYRO3Q06418 890 aa11.39□□□□□ -0.59
SS18-207ENST00000577636 STX1AQ16623 288 aa11.39□□□□□ -0.59
SS18-207ENST00000577636 UVSSAQ2YD98 709 aa11.39□□□□□ -0.59
SS18-207ENST00000577636 PLEKHG4Q58EX7 1191 aa11.39□□□□□ -0.59
SS18-207ENST00000577636 EARS2Q5JPH6 523 aaKnown RBP11.39□□□□□ -0.59
SS18-207ENST00000577636 CELF3Q5SZQ8 465 aaKnown RBP11.39□□□□□ -0.59
SS18-207ENST00000577636 JAKMIP3Q5VZ66 844 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms