RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FAM129BQ96TA1 746 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.31□□□□□ -1.246e-6■■□□□ 11.7
NUP88-212ENST00000576708 RBCK1Q9BYM8 510 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 NIF3L1Q9GZT8 377 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 SPC25Q9HBM1 224 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 ABI2Q9NYB9 513 aaPredicted RBP7.31□□□□□ -1.24
NUP88-212ENST00000576708 NEDD4P46934 1319 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 LAMA2P24043 3122 aaKnown RBP7.3□□□□□ -1.24
NUP88-212ENST00000576708 LRRC37A2A6NM11 1700 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 SIN3BO75182 1162 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 CD4P01730 458 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 ICAM1P05362 532 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 PDHBP11177 359 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 CALML3P27482 149 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 ALDH5A1P51649 535 aaPredicted RBP7.3□□□□□ -1.24
NUP88-212ENST00000576708 NKX3-2P78367 333 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 ORC1Q13415 861 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 FSCN1Q16658 493 aaKnown RBP7.3□□□□□ -1.24
NUP88-212ENST00000576708 TMEM240Q5SV17 173 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 AKNAD1Q5T1N1 836 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 IQSEC1Q6DN90 963 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 MFSD5Q6N075 450 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 MFSD6Q6ZSS7 791 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 KIAA1211Q6ZU35 1233 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 ZNF365Q70YC5 407 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 CHD1LQ86WJ1 897 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 SMC5Q8IY18 1101 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 C1orf127Q8N9H9 656 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 NSUN5Q96P11 429 aaKnown RBP7.3□□□□□ -1.24
NUP88-212ENST00000576708 UBA5Q9GZZ9 404 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 AP5M1Q9H0R1 490 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 TRPV6Q9H1D0 765 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 RWDD1Q9H446 243 aaPredicted RBP7.3□□□□□ -1.24
NUP88-212ENST00000576708 AVENQ9NQS1 362 aaPredicted RBP7.3□□□□□ -1.24
NUP88-212ENST00000576708 TCP11L1Q9NUJ3 509 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 DNAJB12Q9NXW2 375 aaKnown RBP7.3□□□□□ -1.24
NUP88-212ENST00000576708 KANSL3Q9P2N6 904 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 GDF2Q9UK05 429 aaPredicted RBP7.3□□□□□ -1.24
NUP88-212ENST00000576708 LCTP09848 1927 aa7.3□□□□□ -1.24
NUP88-212ENST00000576708 PTPDC1A2A3K4 754 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 ZBTB42B2RXF5 422 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 ZNF213O14771 459 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 TLR3O15455 904 aaKnown RBP7.29□□□□□ -1.24
NUP88-212ENST00000576708 TNFRSF21O75509 655 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 MAP3K6O95382 1288 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 PSAPP07602 524 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 CCL23P55773 120 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 NUCB1Q02818 461 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 EHHADHQ08426 723 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 ZNF543Q08ER8 600 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 ITGA7Q13683 1181 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 ZNF385CQ66K41 422 aaPredicted RBP7.29□□□□□ -1.24
NUP88-212ENST00000576708 CWC27Q6UX04 472 aaKnown RBP7.29□□□□□ -1.24
NUP88-212ENST00000576708 XKR5Q6UX68 686 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 SLCO4C1Q6ZQN7 724 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.29□□□□□ -1.24
NUP88-212ENST00000576708 SVOPQ8N4V2 548 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 SLC43A3Q8NBI5 491 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 MAFAQ8NHW3 353 aaPredicted RBP7.29□□□□□ -1.24
NUP88-212ENST00000576708 MORC4Q8TE76 937 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 EDARADDQ8WWZ3 215 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 TBC1D5Q92609 795 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 COPS5Q92905 334 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 CITED4Q96RK1 184 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 WDR11Q9BZH6 1224 aa7.29□□□□□ -1.24
NUP88-212ENST00000576708 ZMYM6O95789 1325 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 MROH7Q68CQ1 1323 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.28□□□□□ -1.24
NUP88-212ENST00000576708 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.28□□□□□ -1.24
NUP88-212ENST00000576708 B4E1Z4 1266 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 SHISA8B8ZZ34 492 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 J3QW42 95 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 B4GALT4O60513 344 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 PHACTR2O75167 634 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 MYL3P08590 195 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 SNHG28P0DPA3 235 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 EPXP11678 715 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 CYP2C9P11712 490 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 FOSL2P15408 326 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 ADH7P40394 386 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 RPS6P62753 249 aaKnown RBP7.28□□□□□ -1.24
NUP88-212ENST00000576708 PLAURQ03405 335 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 PPIGQ13427 754 aaKnown RBP eCLIP7.28□□□□□ -1.241e-6■■■■□ 24.6
NUP88-212ENST00000576708 USH1GQ495M9 461 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 DUSP28Q4G0W2 176 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 RNF207Q6ZRF8 634 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 TMEM199Q8N511 208 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 USP38Q8NB14 1042 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 OR13H1Q8NG92 308 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 OR6J1Q8NGC5 347 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 TNFRSF25Q93038 417 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 VWCEQ96DN2 955 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 SCLYQ96I15 445 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 TTC14Q96N46 770 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 ASB16Q96NS5 453 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 PBX4Q9BYU1 374 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 WNT8AQ9H1J5 351 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 IL25Q9H293 177 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 CHRDQ9H2X0 955 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 VAT1LQ9HCJ6 419 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms