RNA–Protein interactions for RNA: ENST00000576346.5

NSF-208, Transcript of N-ethylmaleimide sensitive factor, vesicle fusing ATPase, human

TSL 4

Gene NSF, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSF-208	ENST00000576346	UBE4A	Q14139	1066 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	LONRF3	Q496Y0	759 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	TTC38	Q5R3I4	469 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	IFIT1B	Q5T764	474 aa	Known RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	OTUD7B	Q6GQQ9	843 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	CYP26C1	Q6V0L0	522 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346		Q6ZS46	218 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	CCNJL	Q8IV13	435 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	TMEM139	Q8IV31	216 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	FAM114A1	Q8IWE2	563 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	STK11IP	Q8N1F8	1099 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	TMEM130	Q8N3G9	435 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	PDILT	Q8N807	584 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	FANCB	Q8NB91	859 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	CCDC12	Q8WUD4	166 aa	Predicted RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	PIGB	Q92521	554 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	DDX17	Q92841	729 aa	Known RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	SMARCC1	Q92922	1105 aa	Predicted RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	PHKB	Q93100	1093 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	MRRF	Q96E11	262 aa	Known RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	SNX27	Q96L92	541 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	PHF20	Q9BVI0	1012 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	ADAM19	Q9H013	955 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	HSD3B7	Q9H2F3	369 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	ZNF287	Q9HBT7	754 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	TOMM22	Q9NS69	142 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	FANCL	Q9NW38	375 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	PSD3	Q9NYI0	1048 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	ZSWIM5	Q9P217	1185 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	LRP2BP	Q9P2M1	347 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	RWDD2A	Q9UIY3	292 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	DENND2A	Q9ULE3	1009 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	TRIM33	Q9UPN9	1127 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	ZBTB1	Q9Y2K1	713 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	PPME1	Q9Y570	386 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	COL5A3	P25940	1745 aa	Predicted RBP	4.21	□□□□□ -1.73
NSF-208	ENST00000576346	COL24A1	Q17RW2	1714 aa		4.21	□□□□□ -1.73
NSF-208	ENST00000576346	NRAP	Q86VF7	1730 aa		4.21	□□□□□ -1.73
NSF-208	ENST00000576346		A0A0G2JLW4	131 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346		A0A1W2PQC6	194 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	BICDL2	A1A5D9	508 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	VWA3A	A6NCI4	1184 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	BTBD18	B2RXH4	712 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	NFKBIE	O00221	500 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	EXOC5	O00471	708 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	DEAF1	O75398	565 aa	Predicted RBP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	FGR	P09769	529 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	ACPP	P15309	386 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	YBX3	P16989	372 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	GPT	P24298	496 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	EEF1G	P26641	437 aa	Known RBP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	CD97	P48960	835 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	EIF5	P55010	431 aa	Known RBP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	ATP2C1	P98194	919 aa	Predicted RBP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	PDE4B	Q07343	736 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	PAK1	Q13153	545 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	CUL4B	Q13620	913 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	KCNB1	Q14721	858 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	SEC23A	Q15436	765 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	ERCC6L	Q2NKX8	1250 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	HSP90B2P	Q58FF3	399 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	MUM1L1	Q5H9M0	696 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	RRP12	Q5JTH9	1297 aa	Known RBP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	CDKAL1	Q5VV42	579 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	CCDC70	Q6NSX1	233 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	TRIM65	Q6PJ69	517 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	CLEC4G	Q6UXB4	293 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	ZNF662	Q6ZS27	426 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	ARHGAP27	Q6ZUM4	889 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	TMTC3	Q6ZXV5	915 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	RSRC2	Q7L4I2	434 aa	Known RBP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	RASGRP2	Q7LDG7	609 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	SRGAP1	Q7Z6B7	1085 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	ANKRD18A	Q8IVF6	992 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	REXO1L1P	Q8IX06	675 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	IGSF22	Q8N9C0	903 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	TC2N	Q8N9U0	490 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	NUP133	Q8WUM0	1156 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	AK8	Q96MA6	479 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	FAM161B	Q96MY7	647 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	CLIC6	Q96NY7	704 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	TCF12	Q99081	682 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	NAPG	Q99747	312 aa	Predicted RBP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	LZTS2	Q9BRK4	669 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	NUP58	Q9BVL2	599 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	OSBPL7	Q9BZF2	842 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	CRNKL1	Q9BZJ0	848 aa	Known RBP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	TSGA10	Q9BZW7	698 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	ANKRD2	Q9GZV1	360 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	ARMT1	Q9H993	441 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	MED4	Q9NPJ6	270 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	IGSF5	Q9NSI5	407 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	ATP8A2	Q9NTI2	1148 aa		4.21	□□□□□ -1.74
NSF-208	ENST00000576346	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.21	□□□□□ -1.74
NSF-208	ENST00000576346	ADD3	Q9UEY8	706 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms