RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 LGR5O75473 907 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 KRT16P08779 473 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 LRRC63Q05C16 580 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 SNX1Q13596 522 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 TMEM266Q2M3C6 531 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 GNPTABQ3T906 1256 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 GLYCTKQ8IVS8 523 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 KDM4CQ9H3R0 1056 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 CUEDC2Q9H467 287 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 PPP1R9AQ9ULJ8 1098 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 COL18A1P39060 1754 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 DDX60Q8IY21 1712 aaKnown RBP15.78■□□□□ 0.12
SCARF1-209ENST00000576012 ACSL3O95573 720 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 PMS2P54278 862 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 DR1Q01658 176 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 LONRF1Q17RB8 773 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 C18orf8Q96DM3 657 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 AK8Q96MA6 479 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 GPCPD1Q9NPB8 672 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 TMEM59LQ9UK28 342 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 CAMTA1Q9Y6Y1 1673 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 AGBL2Q5U5Z8 902 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 EMC10Q5UCC4 262 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 RBM46Q8TBY0 533 aaKnown RBP15.78■□□□□ 0.12
SCARF1-209ENST00000576012 RAD54LQ92698 747 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 DAAM1Q9Y4D1 1078 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 SFI1A8K8P3 1242 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 MPHOSPH10O00566 681 aaKnown RBP15.78■□□□□ 0.12
SCARF1-209ENST00000576012 DNAJC8O75937 253 aaPredicted RBP15.78■□□□□ 0.12
SCARF1-209ENST00000576012 H2AFZP0C0S5 128 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 MYBP10242 640 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 STAT3P40763 770 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 KCNJ1P48048 391 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 FAM182BQ5T319 152 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 H2AFVQ71UI9 128 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 KRT25Q7Z3Z0 450 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 SPDYE1Q8NFV5 336 aaPredicted RBP15.78■□□□□ 0.12
SCARF1-209ENST00000576012 RNF217Q8TC41 542 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 ZCWPW1Q9H0M4 648 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 HDAC9Q9UKV0 1011 aa15.78■□□□□ 0.12
SCARF1-209ENST00000576012 UCHL3P15374 230 aa15.77■□□□□ 0.12
SCARF1-209ENST00000576012 CASP5P51878 434 aa15.77■□□□□ 0.12
SCARF1-209ENST00000576012 LACTB2Q53H82 288 aaPredicted RBP15.77■□□□□ 0.12
SCARF1-209ENST00000576012 FAM47EQ6ZV65 393 aa15.77■□□□□ 0.12
SCARF1-209ENST00000576012 ARMC2Q8NEN0 867 aa15.77■□□□□ 0.12
SCARF1-209ENST00000576012 NEK9Q8TD19 979 aa15.77■□□□□ 0.12
SCARF1-209ENST00000576012 CELF1Q92879 486 aaKnown RBP15.77■□□□□ 0.12
SCARF1-209ENST00000576012 PBKQ96KB5 322 aa15.77■□□□□ 0.12
SCARF1-209ENST00000576012 GPR101Q96P66 508 aaPredicted RBP15.77■□□□□ 0.12
SCARF1-209ENST00000576012 GGA2Q9UJY4 613 aa15.77■□□□□ 0.12
SCARF1-209ENST00000576012 TXNRD3Q86VQ6 643 aa15.77■□□□□ 0.11
SCARF1-209ENST00000576012 GPBP1Q86WP2 473 aa15.77■□□□□ 0.11
SCARF1-209ENST00000576012 SPIRE2Q8WWL2 714 aa15.77■□□□□ 0.11
SCARF1-209ENST00000576012 ZNF317Q96PQ6 595 aaPredicted RBP15.77■□□□□ 0.11
SCARF1-209ENST00000576012 BMP2KQ9NSY1 1161 aaPredicted RBP15.77■□□□□ 0.11
SCARF1-209ENST00000576012 CTNNAL1Q9UBT7 734 aa15.77■□□□□ 0.11
SCARF1-209ENST00000576012 POTEB3A0JP26 581 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 C5orf60A6NFR6 353 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 POTECB2RU33 542 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 RBAK-RBAKDNI3L0D1 243 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 VPS41P49754 854 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 ARHGAP44Q17R89 818 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 POTEBQ6S5H4 581 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 SH3RF3Q8TEJ3 882 aaPredicted RBP15.76■□□□□ 0.11
SCARF1-209ENST00000576012 NOP53Q9NZM5 478 aaKnown RBP15.76■□□□□ 0.11
SCARF1-209ENST00000576012 AMFRQ9UKV5 643 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 NQO1P15559 274 aaKnown RBP15.76■□□□□ 0.11
SCARF1-209ENST00000576012 GALCP54803 685 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 EXOC3L4Q17RC7 722 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 IRF2BP2Q7Z5L9 587 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 HOOK3Q86VS8 718 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 MRRFQ96E11 262 aaKnown RBP15.76■□□□□ 0.11
SCARF1-209ENST00000576012 POP1Q99575 1024 aaKnown RBP15.76■□□□□ 0.11
SCARF1-209ENST00000576012 EMILIN3Q9NT22 766 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 PRPHP41219 470 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 CASP4P49662 377 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 GRM4Q14833 912 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 TRIP13Q15645 432 aaPredicted RBP15.76■□□□□ 0.11
SCARF1-209ENST00000576012 ZNF34Q8IZ26 560 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 LRRC47Q8N1G4 583 aaKnown RBP15.76■□□□□ 0.11
SCARF1-209ENST00000576012 LRRC57Q8N9N7 239 aa15.76■□□□□ 0.11
SCARF1-209ENST00000576012 ZNF483Q8TF39 744 aaPredicted RBP15.76■□□□□ 0.11
SCARF1-209ENST00000576012 USP17L5A8MUK1 530 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 LRRN2O75325 713 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 GH1P01241 217 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 GNA11P29992 359 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 ERFP50548 548 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 SESN3P58005 492 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 RDH13Q8NBN7 331 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 ACTRT1Q8TDG2 376 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 IQCDQ96DY2 449 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 ROBO1Q9Y6N7 1651 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 COL5A2P05997 1499 aaPredicted RBP15.75■□□□□ 0.11
SCARF1-209ENST00000576012 LAD1O00515 517 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 NCALDP61601 193 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 TAF11Q15544 211 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 ARMC3Q5W041 872 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 ATP8B4Q8TF62 1192 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 ATXN2LQ8WWM7 1075 aaKnown RBP15.75■□□□□ 0.11
SCARF1-209ENST00000576012 SAAL1Q96ER3 474 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms