RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 DBF4BQ8NFT6 615 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 C8orf76Q96K31 380 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 FAM20AQ96MK3 541 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 TMX1Q9H3N1 280 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 AZI2Q9H6S1 392 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 CDHR5Q9HBB8 845 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 TRPC6Q9Y210 931 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 CDY2AQ9Y6F7 541 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 PRRC2BQ5JSZ5 2229 aaKnown RBP9.79□□□□□ -0.84
SMG6-216ENST00000575176 CUL9Q8IWT3 2517 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 MYH11P35749 1972 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.78□□□□□ -0.84
SMG6-216ENST00000575176 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.78□□□□□ -0.84
SMG6-216ENST00000575176 EPOPA6NHQ4 379 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 RRN3P2A6NIE6 340 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 BACH1O14867 736 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 ST18O60284 1047 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 PARNO95453 639 aaKnown RBP9.78□□□□□ -0.84
SMG6-216ENST00000575176 GHRP10912 638 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 GNAT1P11488 350 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 GJB2P29033 226 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 CLCN3P51790 818 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 ZNF484Q5JVG2 852 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 FAM160B1Q5W0V3 765 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 HERC6Q8IVU3 1022 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 RPUSD2Q8IZ73 545 aaKnown RBP9.78□□□□□ -0.84
SMG6-216ENST00000575176 BANK1Q8NDB2 785 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 SP7Q8TDD2 431 aaPredicted RBP9.78□□□□□ -0.84
SMG6-216ENST00000575176 SLC9A7Q96T83 725 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 HSD17B14Q9BPX1 270 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 SH2D3AQ9BRG2 576 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 NIFKQ9BYG3 293 aaKnown RBP9.78□□□□□ -0.84
SMG6-216ENST00000575176 SEMA6BQ9H3T3 888 aa9.78□□□□□ -0.84
SMG6-216ENST00000575176 PDCD11Q14690 1871 aaKnown RBP9.77□□□□□ -0.85
SMG6-216ENST00000575176 POTEMA6NI47 508 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 ZBTB39O15060 712 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 MGEA5O60502 916 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 NEMFO60524 1076 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 LYPLA2O95372 231 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 GJB5O95377 273 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 SPATA31C1P0DKV0 1188 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 ATP2A2P16615 1042 aaKnown RBP9.77□□□□□ -0.85
SMG6-216ENST00000575176 KLRC1P26715 233 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 HTRA4P83105 476 aaPredicted RBP9.77□□□□□ -0.85
SMG6-216ENST00000575176 TMEM62Q0P6H9 643 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 ADGRE1Q14246 886 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 GRIN2CQ14957 1233 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 IL17AQ16552 155 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 PLA2G4FQ68DD2 849 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 TSHZ1Q6ZSZ6 1077 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 MIER3Q7Z3K6 550 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 RTN4RL1Q86UN2 441 aaPredicted RBP9.77□□□□□ -0.85
SMG6-216ENST00000575176 LRRC71Q8N4P6 559 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 RETREG2Q8NC44 543 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 FAM167AQ96KS9 214 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 LXNQ9BS40 222 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 FAM49AQ9H0Q0 323 aaPredicted RBP9.77□□□□□ -0.85
SMG6-216ENST00000575176 NKX2-4Q9H2Z4 354 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 ADAMTS10Q9H324 1103 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 ERVK-5Q9HDB9 667 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 XPNPEP1Q9NQW7 623 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 RGL1Q9NZL6 768 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 PCDHA11Q9Y5I1 949 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 TRPV2Q9Y5S1 764 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 BDP1A6H8Y1 2624 aa9.77□□□□□ -0.85
SMG6-216ENST00000575176 ABHD14A-ACY1A0A1B0GW23 586 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 LPXNO60711 386 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 SLITRK3O94933 977 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 CA3P07451 260 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 CD52P31358 61 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 MCM2P49736 904 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 TAP1Q03518 808 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 ORC2Q13416 577 aaPredicted RBP9.76□□□□□ -0.85
SMG6-216ENST00000575176 DSC3Q14574 896 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 EPHA7Q15375 998 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 FAM228AQ86W67 206 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 PHOSPHO2Q8TCD6 241 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 TIFAQ96CG3 184 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 DYDC2Q96IM9 177 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 FAM161BQ96MY7 647 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 CDX2Q99626 313 aaPredicted RBP9.76□□□□□ -0.85
SMG6-216ENST00000575176 NAP1L4Q99733 375 aaKnown RBP9.76□□□□□ -0.85
SMG6-216ENST00000575176 IFIH1Q9BYX4 1025 aaKnown RBP9.76□□□□□ -0.85
SMG6-216ENST00000575176 CELF4Q9BZC1 486 aaKnown RBP9.76□□□□□ -0.85
SMG6-216ENST00000575176 DHX33Q9H6R0 707 aaKnown RBP9.76□□□□□ -0.85
SMG6-216ENST00000575176 BRMS1Q9HCU9 246 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.76□□□□□ -0.85
SMG6-216ENST00000575176 PCDHB6Q9Y5E3 794 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 SLC4A7Q9Y6M7 1214 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 SQORQ9Y6N5 450 aa9.76□□□□□ -0.85
SMG6-216ENST00000575176 ZBBXA8MT70 800 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 MAFO75444 373 aaPredicted RBP9.75□□□□□ -0.85
SMG6-216ENST00000575176 MED24O75448 989 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 VTNP04004 478 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 P4HBP07237 508 aaKnown RBP9.75□□□□□ -0.85
SMG6-216ENST00000575176 MCM7P33993 719 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 QARSP47897 775 aaKnown RBP9.75□□□□□ -0.85
SMG6-216ENST00000575176 TRAPPC10P48553 1259 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 GPC3P51654 580 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 NPEPPSP55786 919 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms