RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 C22orf31O95567 290 aa18.19■□□□□ 0.5
PFN1-203ENST00000574872 TIMP1P01033 207 aa18.19■□□□□ 0.5
PFN1-203ENST00000574872 RPA1P27694 616 aa18.19■□□□□ 0.5
PFN1-203ENST00000574872 THPOP40225 353 aa18.19■□□□□ 0.5
PFN1-203ENST00000574872 CCL23P55773 120 aa18.19■□□□□ 0.5
PFN1-203ENST00000574872 MDM2Q00987 491 aaPredicted RBP18.19■□□□□ 0.5
PFN1-203ENST00000574872 SPECC1Q5M775 1068 aa18.19■□□□□ 0.5
PFN1-203ENST00000574872 KRT79Q5XKE5 535 aa18.19■□□□□ 0.5
PFN1-203ENST00000574872 ZNF579Q8NAF0 562 aaKnown RBP18.19■□□□□ 0.5
PFN1-203ENST00000574872 BADQ92934 168 aa18.19■□□□□ 0.5
PFN1-203ENST00000574872 CEP170P1Q96L14 293 aa18.19■□□□□ 0.5
PFN1-203ENST00000574872 CLIC6Q96NY7 704 aa18.19■□□□□ 0.5
PFN1-203ENST00000574872 MMTAG2Q9BU76 263 aaKnown RBP18.19■□□□□ 0.5
PFN1-203ENST00000574872 NIFKQ9BYG3 293 aaKnown RBP18.19■□□□□ 0.5
PFN1-203ENST00000574872 CSRNP2Q9H175 543 aa18.19■□□□□ 0.5
PFN1-203ENST00000574872 BMP2KQ9NSY1 1161 aaPredicted RBP18.19■□□□□ 0.5
PFN1-203ENST00000574872 SPTLC2O15270 562 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 CTSHP09668 335 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 BFSP2Q13515 415 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 TARBP2Q15633 366 aaKnown RBP18.18■□□□□ 0.5
PFN1-203ENST00000574872 TRIM71Q2Q1W2 868 aaKnown RBP18.18■□□□□ 0.5
PFN1-203ENST00000574872 XKR9Q5GH70 373 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 CCDC155Q8N6L0 562 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 METTL13Q8N6R0 699 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 CAGE1Q8TC20 777 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 DNAJB3Q8WWF6 145 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 SCLYQ96I15 445 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 PLIN2Q99541 437 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 WNT8AQ9H1J5 351 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 CYP26B1Q9NR63 512 aa18.18■□□□□ 0.5
PFN1-203ENST00000574872 SRPRBQ9Y5M8 271 aaKnown RBP18.18■□□□□ 0.5
PFN1-203ENST00000574872 LYPLA2O95372 231 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 YEATS4O95619 227 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 CKBP12277 381 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 LONP1P36776 959 aaKnown RBP18.17■□□□□ 0.5
PFN1-203ENST00000574872 MAGEA10P43363 369 aaPredicted RBP18.17■□□□□ 0.5
PFN1-203ENST00000574872 TBC1D8BQ0IIM8 1120 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 TAF2Q6P1X5 1199 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 OTUD6AQ7L8S5 288 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 CABP7Q86V35 215 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 LRRC71Q8N4P6 559 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 KRI1Q8N9T8 703 aaKnown RBP18.17■□□□□ 0.5
PFN1-203ENST00000574872 RETREG2Q8NC44 543 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 AK8Q96MA6 479 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 CCDC43Q96MW1 224 aaKnown RBP18.17■□□□□ 0.5
PFN1-203ENST00000574872 LBHD1Q9BQE6 289 aaPredicted RBP18.17■□□□□ 0.5
PFN1-203ENST00000574872 SUGCTQ9HAC7 445 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 DDX19AQ9NUU7 478 aaKnown RBP18.17■□□□□ 0.5
PFN1-203ENST00000574872 CFAP45Q9UL16 551 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 KIAA1024Q9UPX6 916 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 PCDHA2Q9Y5H9 948 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 ATP6V1DQ9Y5K8 247 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 STK24Q9Y6E0 443 aa18.17■□□□□ 0.5
PFN1-203ENST00000574872 PITPNM1O00562 1244 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 UBA7P41226 1012 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 CLCN3P51790 818 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 KRT85P78386 507 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 TMEM62Q0P6H9 643 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 ZNF618Q5T7W0 954 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 ATL3Q6DD88 541 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 LRRC8DQ7L1W4 858 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 CDK5RAP3Q96JB5 506 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 NACC1Q96RE7 527 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 CEP89Q96ST8 783 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 PPP1R16BQ96T49 567 aa18.16■□□□□ 0.5
PFN1-203ENST00000574872 LTBP2Q14767 1821 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 SMIM35A0A1B0GVV1 85 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 MAGEB2O15479 319 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 PPP6R2O75170 966 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 CSF2RAP15509 400 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 SELPP16109 830 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 POLGP54098 1239 aaPredicted RBP18.15■□□□□ 0.5
PFN1-203ENST00000574872 MFSD5Q6N075 450 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 EFCAB12Q6NXP0 572 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 USP49Q70CQ1 688 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 RASSF8Q8NHQ8 419 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 KCNG4Q8TDN1 519 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 SYMPKQ92797 1274 aaKnown RBP18.15■□□□□ 0.5
PFN1-203ENST00000574872 EPSTI1Q96J88 318 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 PNMA5Q96PV4 448 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 ANKEF1Q9NU02 776 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 CIZ1Q9ULV3 898 aaPredicted RBP18.15■□□□□ 0.5
PFN1-203ENST00000574872 MORC2Q9Y6X9 1032 aaPredicted RBP18.15■□□□□ 0.5
PFN1-203ENST00000574872 KDM3AQ9Y4C1 1321 aa18.15■□□□□ 0.5
PFN1-203ENST00000574872 E9PMD0 336 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 IQCF3P0C7M6 154 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 ME1P48163 572 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 RARRES1P49788 294 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 FPGSQ05932 587 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 RBL2Q08999 1139 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 GRB10Q13322 594 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 DRP2Q13474 957 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 KARSQ15046 597 aaKnown RBP18.14■□□□□ 0.49
PFN1-203ENST00000574872 KCNK18Q7Z418 384 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 RSPH3Q86UC2 560 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 KIAA0319LQ8IZA0 1049 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 TMEM199Q8N511 208 aa18.14■□□□□ 0.49
PFN1-203ENST00000574872 LEO1Q8WVC0 666 aaPredicted RBP18.14■□□□□ 0.49
PFN1-203ENST00000574872 IPO9Q96P70 1041 aaKnown RBP18.14■□□□□ 0.49
PFN1-203ENST00000574872 AKT3Q9Y243 479 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms