RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 BDH2Q9BUT1 245 aa6.91□□□□□ -1.3
CDC27-216ENST00000574304 KATNBL1Q9H079 304 aa6.91□□□□□ -1.3
CDC27-216ENST00000574304 IFT57Q9NWB7 429 aa6.91□□□□□ -1.3
CDC27-216ENST00000574304 OXSMQ9NWU1 459 aa6.91□□□□□ -1.3
CDC27-216ENST00000574304 PLATP00750 562 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 ATP2A2P16615 1042 aaKnown RBP6.9□□□□□ -1.3
CDC27-216ENST00000574304 SLC9A1P19634 815 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 PTX3P26022 381 aaPredicted RBP6.9□□□□□ -1.3
CDC27-216ENST00000574304 HSD3B2P26439 372 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 ADCY8P40145 1251 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 CD83Q01151 205 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 ALDH6A1Q02252 535 aaKnown RBP6.9□□□□□ -1.3
CDC27-216ENST00000574304 DSG1Q02413 1049 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 SKOR2Q2VWA4 1001 aaPredicted RBP6.9□□□□□ -1.3
CDC27-216ENST00000574304 KANK2Q63ZY3 851 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 GPR155Q7Z3F1 870 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 RALYLQ86SE5 291 aaKnown RBP6.9□□□□□ -1.3
CDC27-216ENST00000574304 E2F7Q96AV8 911 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 FOXB1Q99853 325 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 H2AFY2Q9P0M6 372 aaPredicted RBP6.9□□□□□ -1.3
CDC27-216ENST00000574304 FBXO10Q9UK96 956 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 SPO11Q9Y5K1 396 aa6.9□□□□□ -1.3
CDC27-216ENST00000574304 KRTAP9-7A8MTY7 169 aa6.89□□□□□ -1.31
CDC27-216ENST00000574304 GSG1L2A8MUP6 293 aa6.89□□□□□ -1.31
CDC27-216ENST00000574304 B4GALT4O60513 344 aa6.89□□□□□ -1.31
CDC27-216ENST00000574304 MYCLP1P12525 358 aaPredicted RBP6.89□□□□□ -1.31
CDC27-216ENST00000574304 USP10Q14694 798 aaKnown RBP6.89□□□□□ -1.31
CDC27-216ENST00000574304 SURF1Q15526 300 aa6.89□□□□□ -1.31
CDC27-216ENST00000574304 SEPT7Q16181 437 aaKnown RBP6.89□□□□□ -1.31
CDC27-216ENST00000574304 TBC1D10BQ4KMP7 808 aaPredicted RBP6.89□□□□□ -1.31
CDC27-216ENST00000574304 OTOP2Q7RTS6 562 aa6.89□□□□□ -1.31
CDC27-216ENST00000574304 IFNL2Q8IZJ0 200 aa6.89□□□□□ -1.31
CDC27-216ENST00000574304 C16orf92Q96LL3 132 aa6.89□□□□□ -1.31
CDC27-216ENST00000574304 ELF4Q99607 663 aaPredicted RBP6.89□□□□□ -1.31
CDC27-216ENST00000574304 CARD11Q9BXL7 1154 aa6.89□□□□□ -1.31
CDC27-216ENST00000574304 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.89□□□□□ -1.31
CDC27-216ENST00000574304 ZNF536O15090 1300 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 A0A087X0B3 334 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 LAMTOR5O43504 91 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 PDE8AO60658 829 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 ZNF888P0CJ79 500 aaPredicted RBP6.88□□□□□ -1.31
CDC27-216ENST00000574304 APEX1P27695 318 aaKnown RBP6.88□□□□□ -1.31
CDC27-216ENST00000574304 ETV4P43268 484 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 KCNQ1P51787 676 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 SLC6A3Q01959 620 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 EPHA7Q15375 998 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 ARHGEF18Q6ZSZ5 1173 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 CHTF18Q8WVB6 975 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 ZDHHC5Q9C0B5 715 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 SLKQ9H2G2 1235 aaPredicted RBP6.88□□□□□ -1.31
CDC27-216ENST00000574304 TOMM22Q9NS69 142 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 THG1LQ9NWX6 298 aaKnown RBP6.88□□□□□ -1.31
CDC27-216ENST00000574304 PTPN22Q9Y2R2 807 aa6.88□□□□□ -1.31
CDC27-216ENST00000574304 A0A0G2JNJ9 132 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 UBA6A0AVT1 1052 aaPredicted RBP6.87□□□□□ -1.31
CDC27-216ENST00000574304 PRLP01236 227 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 HMGCRP04035 888 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 CELA3BP08861 270 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 SCNN1BP51168 640 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 PPP2CBP62714 309 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 PPP2CAP67775 309 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 ROM1Q03395 351 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 PLP2Q04941 152 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 MOGSQ13724 837 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 SART3Q15020 963 aaKnown RBP6.87□□□□□ -1.31
CDC27-216ENST00000574304 ESRP1Q6NXG1 681 aaKnown RBP6.87□□□□□ -1.31
CDC27-216ENST00000574304 NME9Q86XW9 330 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 EFHBQ8N7U6 833 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 OR2W6PQ8NHA6 318 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 LEO1Q8WVC0 666 aaPredicted RBP6.87□□□□□ -1.31
CDC27-216ENST00000574304 Q9UFV3 132 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 CDC42EP3Q9UKI2 254 aa6.87□□□□□ -1.31
CDC27-216ENST00000574304 B8ZZF3 427 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 ITGB3P05106 788 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 KPNA1P52294 538 aaPredicted RBP6.86□□□□□ -1.31
CDC27-216ENST00000574304 EPHB4P54760 987 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 RRADP55042 308 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 EIF4HQ15056 248 aaKnown RBP6.86□□□□□ -1.31
CDC27-216ENST00000574304 TTC38Q5R3I4 469 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 TMEM200BQ69YZ2 307 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 GRAMD4Q6IC98 578 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 SLFN12LQ6IEE8 588 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 SMC1BQ8NDV3 1235 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 MAML3Q96JK9 1138 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 SCYL1Q96KG9 808 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 GPR101Q96P66 508 aaPredicted RBP6.86□□□□□ -1.31
CDC27-216ENST00000574304 JADE2Q9NQC1 790 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 MAPRE3Q9UPY8 281 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 SLC4A7Q9Y6M7 1214 aa6.86□□□□□ -1.31
CDC27-216ENST00000574304 MAFO75444 373 aaPredicted RBP6.85□□□□□ -1.31
CDC27-216ENST00000574304 CNOT4O95628 575 aaKnown RBP6.85□□□□□ -1.31
CDC27-216ENST00000574304 RGS3P49796 1198 aa6.85□□□□□ -1.31
CDC27-216ENST00000574304 ADCY1Q08828 1119 aa6.85□□□□□ -1.31
CDC27-216ENST00000574304 MAP3K12Q12852 859 aa6.85□□□□□ -1.31
CDC27-216ENST00000574304 LCE1DQ5T752 114 aa6.85□□□□□ -1.31
CDC27-216ENST00000574304 PRAMEF9Q5VWM5 478 aa6.85□□□□□ -1.31
CDC27-216ENST00000574304 PASD1Q8IV76 773 aa6.85□□□□□ -1.31
CDC27-216ENST00000574304 ZZZ3Q8IYH5 903 aa6.85□□□□□ -1.31
CDC27-216ENST00000574304 TUBGCP5Q96RT8 1024 aa6.85□□□□□ -1.31
CDC27-216ENST00000574304 RBM15Q96T37 977 aaKnown RBP eCLIP6.85□□□□□ -1.318e-12■■□□□ 13.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms