RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 DHX58Q96C10 678 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 CCDC34Q96HJ3 373 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 CCDC43Q96MW1 224 aaKnown RBP7.48□□□□□ -1.21
PRPF8-210ENST00000574217 PNMA5Q96PV4 448 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 NACC1Q96RE7 527 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 PCYT2Q99447 389 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 C16orf70Q9BSU1 422 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 DACT1Q9NYF0 836 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 ERAP1Q9NZ08 941 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 WRAP73Q9P2S5 460 aaPredicted RBP7.48□□□□□ -1.21
PRPF8-210ENST00000574217 STK17AQ9UEE5 414 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 USP25Q9UHP3 1055 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 DNM3Q9UQ16 869 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 ATP11BQ9Y2G3 1177 aa7.48□□□□□ -1.21
PRPF8-210ENST00000574217 KAT6AQ92794 2004 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 E9PMD0 336 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 H3BRB1 525 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 HAS3O00219 553 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 ACTN4O43707 911 aaKnown RBP7.47□□□□□ -1.21
PRPF8-210ENST00000574217 ZNF862O60290 1169 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 EVI5O60447 810 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 PQBP1O60828 265 aaKnown RBP7.47□□□□□ -1.21
PRPF8-210ENST00000574217 F2P00734 622 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 OATP04181 439 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 SLFN14P0C7P3 912 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 XRCC6P12956 609 aaKnown RBP eCLIP7.47□□□□□ -1.21
PRPF8-210ENST00000574217 MARK3P27448 753 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 YWHABP31946 246 aaKnown RBP7.47□□□□□ -1.21
PRPF8-210ENST00000574217 CDK7P50613 346 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 TLE2Q04725 743 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 MFSD10Q14728 455 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 E2F4Q16254 413 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 KIAA0753Q2KHM9 967 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 KLHL40Q2TBA0 621 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 LONRF3Q496Y0 759 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 NAALADL2Q58DX5 795 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 XKR3Q5GH77 459 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 C1orf53Q5VUE5 145 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 KANK3Q6NY19 840 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 KRBA2Q6ZNG9 492 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 OTUD6AQ7L8S5 288 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 TRMT1LQ7Z2T5 733 aaKnown RBP7.47□□□□□ -1.21
PRPF8-210ENST00000574217 CNNM3Q8NE01 707 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 PIGOQ8TEQ8 1089 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 LARP4BQ92615 738 aaKnown RBP7.47□□□□□ -1.21
PRPF8-210ENST00000574217 RAD54LQ92698 747 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 FAM167AQ96KS9 214 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 TIGD1Q96MW7 591 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 KATNAL1Q9BW62 490 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 TUT1Q9H6E5 874 aaKnown RBP7.47□□□□□ -1.21
PRPF8-210ENST00000574217 MAGEF1Q9HAY2 307 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 NRBP2Q9NSY0 501 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 PCDH10Q9P2E7 1040 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 SEPT9Q9UHD8 586 aaPredicted RBP7.47□□□□□ -1.21
PRPF8-210ENST00000574217 SERTAD1Q9UHV2 236 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 HOOK1Q9UJC3 728 aaKnown RBP7.47□□□□□ -1.21
PRPF8-210ENST00000574217 DBR1Q9UK59 544 aaKnown RBP7.47□□□□□ -1.21
PRPF8-210ENST00000574217 TRPC6Q9Y210 931 aa7.47□□□□□ -1.21
PRPF8-210ENST00000574217 LTBP2Q14767 1821 aa7.46□□□□□ -1.21
PRPF8-210ENST00000574217 ARHGEF35A5YM69 484 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 ZBTB39O15060 712 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 TRAK2O60296 914 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 B4GALT4O60513 344 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 EYA4O95677 639 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 SSBP05455 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
PRPF8-210ENST00000574217 PLA2G4BP0C869 781 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 ATP4AP20648 1035 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 AMPD3Q01432 767 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 FAAP100Q0VG06 881 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 HIC1Q14526 733 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 DHX8Q14562 1220 aaKnown RBP7.46□□□□□ -1.22
PRPF8-210ENST00000574217 MCM6Q14566 821 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 PLCB4Q15147 1175 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 XKR9Q5GH70 373 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 FAM47CQ5HY64 1035 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 NFRKBQ6P4R8 1299 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 ANO5Q75V66 913 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 SV2BQ7L1I2 683 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 ANKRD33Q7Z3H0 272 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 KCNK18Q7Z418 384 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 SH3RF1Q7Z6J0 888 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 FAM126BQ8IXS8 530 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 SYT2Q8N9I0 419 aaPredicted RBP7.46□□□□□ -1.22
PRPF8-210ENST00000574217 ATP8B4Q8TF62 1192 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 LRRC15Q8TF66 581 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 BBXQ8WY36 941 aaPredicted RBP7.46□□□□□ -1.22
PRPF8-210ENST00000574217 SYAP1Q96A49 352 aaPredicted RBP7.46□□□□□ -1.22
PRPF8-210ENST00000574217 TOX2Q96NM4 488 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 LRRC27Q9C0I9 530 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 TRPV6Q9H1D0 765 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 BHMT2Q9H2M3 363 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 TNMDQ9H2S6 317 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 RNPEPQ9H4A4 650 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 ANKEF1Q9NU02 776 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 BLOC1S4Q9NUP1 217 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 TRMT13Q9NUP7 481 aaKnown RBP7.46□□□□□ -1.22
PRPF8-210ENST00000574217 HDAC6Q9UBN7 1215 aa7.46□□□□□ -1.22
PRPF8-210ENST00000574217 ZMYND8Q9ULU4 1186 aaPredicted RBP7.46□□□□□ -1.22
PRPF8-210ENST00000574217 A0A087WWV3 80 aa7.45□□□□□ -1.22
PRPF8-210ENST00000574217 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms