RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CCDC196A0A1B0GTZ2 297 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 BLACEA4D250 179 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 CCDC69A6NI79 296 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 WDR64B1ANS9 1081 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 TRAF5O00463 557 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 IPO8O15397 1037 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 KIF1CO43896 1103 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 DTNBO60941 627 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 PAPLNO95428 1278 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 TGDSO95455 350 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 SGPL1O95470 568 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 PLATP00750 562 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 SCG2P13521 617 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 EEF2P13639 858 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 KRT13P13646 458 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 ALOX15P16050 662 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 ATP2A2P16615 1042 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 HSPA4P34932 840 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 SLC19A1P41440 591 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 AGFG1P52594 562 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 ARF3P61204 181 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 RAC1P63000 192 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 ARF1P84077 181 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 NRG1Q02297 640 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 ZNF543Q08ER8 600 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 MAP4K2Q12851 820 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 MRPL28Q13084 256 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 FAM110CQ1W6H9 321 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 KRTCAP3Q53RY4 240 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 GNASQ5JWF2 1037 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 PPP1R26Q5T8A7 1209 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 LCE2AQ5TA79 106 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 MEX3CQ5U5Q3 659 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 BROXQ5VW32 411 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 HAUS3Q68CZ6 603 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 GGT6Q6P531 493 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 ABHD17CQ6PCB6 329 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 LBX2Q6XYB7 198 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 TTLL7Q6ZT98 887 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 USP45Q70EL2 814 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 PPFIBP1Q86W92 1011 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 NCAPG2Q86XI2 1143 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 CREG2Q8IUH2 290 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 SLC44A2Q8IWA5 706 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 RNF168Q8IYW5 571 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 CCDC116Q8IYX3 515 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 IGSF22Q8N9C0 903 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 SIMC1Q8NDZ2 872 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 BVESQ8NE79 360 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 TDRD7Q8NHU6 1098 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 LMBR1Q8WVP7 490 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 RUBCNQ92622 972 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 HTRA1Q92743 480 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 SYAP1Q96A49 352 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 ZNF845Q96IR2 970 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 HHIPQ96QV1 700 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 HAUS7Q99871 368 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 PYM1Q9BRP8 204 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 CNPPD1Q9BV87 410 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 SORBS1Q9BX66 1292 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 EDEM3Q9BZQ6 932 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 CYP26B1Q9NR63 512 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 ZSWIM5Q9P217 1185 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 DUSP12Q9UNI6 340 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 TRIM33Q9UPN9 1127 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 CORO2BQ9UQ03 480 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 CEP83Q9Y592 693 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 PCDHA9Q9Y5H5 950 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 SNX13Q9Y5W8 968 aa5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 ZFP37Q9Y6Q3 630 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-210ENST00000572787 PI4KAP2A4QPH2 592 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 GOLGA6L3A6NEY3 463 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 FAM187AA6NFU0 413 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 H0Y626 953 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 STXBP3O00186 592 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 AOC2O75106 756 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 GUCA1CO95843 209 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 EOMESO95936 686 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 CYP17A1P05093 508 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 ZBTB48P10074 688 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 PDCP20941 246 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 GRNP28799 593 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 HOXD13P35453 343 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 ACTN2P35609 894 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 ADH7P40394 386 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 MSH2P43246 934 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 HSPA7P48741 367 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 ALDH9A1P49189 494 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 SEPHS1P49903 392 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 ZNF157P51786 506 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 CLCN2P51788 898 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 AKAP17AQ02040 695 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 GUCY1A3Q02108 690 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 PTPN11Q06124 597 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 MAPK7Q13164 816 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 ADAM15Q13444 863 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 RASA2Q15283 850 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 NTRK3Q16288 839 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 PFKFB4Q16877 469 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms