RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 TMEM87BQ96K49 555 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 RPGRIP1Q96KN7 1286 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 TLE6Q9H808 572 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 CDH22Q9UJ99 828 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 LRFN2Q9ULH4 789 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 IGKV6D-21A0A0A0MT36 114 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 TBKBP1A7MCY6 615 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 ADAMTS3O15072 1205 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 ATG7O95352 703 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 FGFR1P11362 822 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 ATP4AP20648 1035 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 LIFRP42702 1097 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 VCPP55072 806 aaKnown RBP21.9■■□□□ 1.1
NUP88-203ENST00000572019 APOBRQ0VD83 1088 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 CCDC60Q8IWA6 550 aaPredicted RBP21.9■■□□□ 1.1
NUP88-203ENST00000572019 SUSD6Q92537 303 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 PPP2R3CQ969Q6 453 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 ADAM2Q99965 735 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 MTA3Q9BTC8 594 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 CACNA1HO95180 2353 aa21.9■■□□□ 1.1
NUP88-203ENST00000572019 C9IYK1 514 aa21.89■■□□□ 1.09
NUP88-203ENST00000572019 FGF18O76093 207 aa21.89■■□□□ 1.09
NUP88-203ENST00000572019 DUSP6Q16828 381 aa21.89■■□□□ 1.09
NUP88-203ENST00000572019 MICAL1Q8TDZ2 1067 aa21.89■■□□□ 1.09
NUP88-203ENST00000572019 SDF4Q9BRK5 362 aa21.89■■□□□ 1.09
NUP88-203ENST00000572019 APOL5Q9BWW9 433 aa21.89■■□□□ 1.09
NUP88-203ENST00000572019 PHF7Q9BWX1 381 aaPredicted RBP21.89■■□□□ 1.09
NUP88-203ENST00000572019 ANO3Q9BYT9 981 aa21.89■■□□□ 1.09
NUP88-203ENST00000572019 TYW1Q9NV66 732 aaKnown RBP21.89■■□□□ 1.09
NUP88-203ENST00000572019 ST3GAL5Q9UNP4 418 aa21.89■■□□□ 1.09
NUP88-203ENST00000572019 PCDHB7Q9Y5E2 793 aa21.89■■□□□ 1.09
NUP88-203ENST00000572019 SLC12A7Q9Y666 1083 aa21.89■■□□□ 1.09
NUP88-203ENST00000572019 FSCN2O14926 492 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 RPLP2P05387 115 aaKnown RBP21.88■■□□□ 1.09
NUP88-203ENST00000572019 FUT2Q10981 343 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 KCNC3Q14003 757 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 CEP55Q53EZ4 464 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 ABHD15Q6UXT9 468 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 COLGALT1Q8NBJ5 622 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 ASIC4Q96FT7 647 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 TCEANC2Q96MN5 208 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 CWH43Q9H720 699 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 RIC8AQ9NPQ8 531 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 TLR9Q9NR96 1032 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 RGS18Q9NS28 235 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 FAM86C1Q9NVL1 165 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 PLXNA3P51805 1871 aa21.88■■□□□ 1.09
NUP88-203ENST00000572019 MEIS1O00470 390 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 RPS6KA5O75582 802 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 CALM1P0DP23 149 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 CALM2P0DP24 149 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 CALM3P0DP25 149 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 SP100P23497 879 aaPredicted RBP21.87■■□□□ 1.09
NUP88-203ENST00000572019 KIZQ2M2Z5 673 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 SPOUT1Q5T280 376 aaKnown RBP21.87■■□□□ 1.09
NUP88-203ENST00000572019 CREB3L3Q68CJ9 461 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 LRRC55Q6ZSA7 311 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 FAM228AQ86W67 206 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 TMTC2Q8N394 836 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 NME8Q8N427 588 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 OSMRQ99650 979 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 S1PR5Q9H228 398 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 RNF19AQ9NV58 838 aa21.87■■□□□ 1.09
NUP88-203ENST00000572019 FAM86B1E9PN63 330 aa21.86■■□□□ 1.09
NUP88-203ENST00000572019 DHX15O43143 795 aaKnown RBP21.86■■□□□ 1.09
NUP88-203ENST00000572019 FAM86B2P0C5J1 330 aa21.86■■□□□ 1.09
NUP88-203ENST00000572019 PBX3P40426 434 aa21.86■■□□□ 1.09
NUP88-203ENST00000572019 NAPAP54920 295 aa21.86■■□□□ 1.09
NUP88-203ENST00000572019 NECTIN1Q15223 517 aa21.86■■□□□ 1.09
NUP88-203ENST00000572019 PLPP4Q5VZY2 271 aa21.86■■□□□ 1.09
NUP88-203ENST00000572019 SYCE2Q6PIF2 218 aa21.86■■□□□ 1.09
NUP88-203ENST00000572019 FBXL6Q8N531 539 aa21.86■■□□□ 1.09
NUP88-203ENST00000572019 BRPF3Q9ULD4 1205 aa21.86■■□□□ 1.09
NUP88-203ENST00000572019 PCDHB12Q9Y5F1 795 aa21.86■■□□□ 1.09
NUP88-203ENST00000572019 DENND3A2RUS2 1198 aa21.85■■□□□ 1.09
NUP88-203ENST00000572019 HIDE1A8MVS5 230 aa21.85■■□□□ 1.09
NUP88-203ENST00000572019 BACH1O14867 736 aa21.85■■□□□ 1.09
NUP88-203ENST00000572019 HBP1O60381 514 aa21.85■■□□□ 1.09
NUP88-203ENST00000572019 PDGFBP01127 241 aaPredicted RBP21.85■■□□□ 1.09
NUP88-203ENST00000572019 VTNP04004 478 aa21.85■■□□□ 1.09
NUP88-203ENST00000572019 CLK2P49760 499 aaKnown RBP21.85■■□□□ 1.09
NUP88-203ENST00000572019 DSC3Q14574 896 aa21.85■■□□□ 1.09
NUP88-203ENST00000572019 SLC24A5Q71RS6 500 aa21.85■■□□□ 1.09
NUP88-203ENST00000572019 TRMT1LQ7Z2T5 733 aaKnown RBP21.85■■□□□ 1.09
NUP88-203ENST00000572019 SGMS1Q86VZ5 419 aa21.85■■□□□ 1.09
NUP88-203ENST00000572019 THNSL1Q8IYQ7 743 aa21.85■■□□□ 1.09
NUP88-203ENST00000572019 GPR32O75388 356 aa21.84■■□□□ 1.09
NUP88-203ENST00000572019 C22orf31O95567 290 aa21.84■■□□□ 1.09
NUP88-203ENST00000572019 SREBF1P36956 1147 aa21.84■■□□□ 1.09
NUP88-203ENST00000572019 ADCY7P51828 1080 aa21.84■■□□□ 1.09
NUP88-203ENST00000572019 IRX6P78412 446 aaPredicted RBP21.84■■□□□ 1.09
NUP88-203ENST00000572019 UBE3AQ05086 875 aa21.84■■□□□ 1.09
NUP88-203ENST00000572019 SIGLEC14Q08ET2 396 aa21.84■■□□□ 1.09
NUP88-203ENST00000572019 SWSAP1Q6NVH7 229 aa21.84■■□□□ 1.09
NUP88-203ENST00000572019 LLGL2Q6P1M3 1020 aa21.84■■□□□ 1.09
NUP88-203ENST00000572019 APOA5Q6Q788 366 aa21.84■■□□□ 1.09
NUP88-203ENST00000572019 FAM217BQ9NTX9 383 aaPredicted RBP21.84■■□□□ 1.09
NUP88-203ENST00000572019 V9GY48 417 aaPredicted RBP21.84■■□□□ 1.09
NUP88-203ENST00000572019 IGLV3-22A0A075B6J6 115 aa21.83■■□□□ 1.09
NUP88-203ENST00000572019 ATF7P17544 494 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms