RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 CXXC1Q9P0U4 656 aaPredicted RBP7.85□□□□□ -1.15
SMG6-209ENST00000571442 NOL7Q9UMY1 257 aaKnown RBP7.85□□□□□ -1.15
SMG6-209ENST00000571442 NOD1Q9Y239 953 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 GBF1Q92538 1859 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 RRN3P2A6NIE6 340 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 MARCH6O60337 910 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 BAG4O95429 457 aaKnown RBP7.84□□□□□ -1.15
SMG6-209ENST00000571442 P4HBP07237 508 aaKnown RBP7.84□□□□□ -1.15
SMG6-209ENST00000571442 SELPP16109 830 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 QARSP47897 775 aaKnown RBP7.84□□□□□ -1.15
SMG6-209ENST00000571442 SLC26A2P50443 739 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 FXR2P51116 673 aaKnown RBP eCLIP7.84□□□□□ -1.15
SMG6-209ENST00000571442 CLCN3P51790 818 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 PSMC5P62195 406 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 ORC2Q13416 577 aaPredicted RBP7.84□□□□□ -1.15
SMG6-209ENST00000571442 BFSP2Q13515 415 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 SF3A1Q15459 793 aaKnown RBP7.84□□□□□ -1.15
SMG6-209ENST00000571442 MTERF2Q49AM1 385 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 RILPL1Q5EBL4 403 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 ZNF484Q5JVG2 852 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 FAM26DQ5JW98 314 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 BRAPQ7Z569 592 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 CATSPER3Q86XQ3 398 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 TPH2Q8IWU9 490 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 C4orf19Q8IY42 314 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 KIAA0319LQ8IZA0 1049 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 IGSF22Q8N9C0 903 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 CAGE1Q8TC20 777 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 PIGOQ8TEQ8 1089 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 TMEM40Q8WWA1 233 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 ZNF668Q96K58 619 aaPredicted RBP7.84□□□□□ -1.15
SMG6-209ENST00000571442 NIFKQ9BYG3 293 aaKnown RBP7.84□□□□□ -1.15
SMG6-209ENST00000571442 IL23AQ9NPF7 189 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 BMP2KQ9NSY1 1161 aaPredicted RBP7.84□□□□□ -1.15
SMG6-209ENST00000571442 SEPT9Q9UHD8 586 aaPredicted RBP7.84□□□□□ -1.15
SMG6-209ENST00000571442 TCEAL9Q9UHQ7 104 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 PCDHA2Q9Y5H9 948 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 MICAL3Q7RTP6 2002 aa7.84□□□□□ -1.15
SMG6-209ENST00000571442 COL1A2P08123 1366 aa7.84□□□□□ -1.16
SMG6-209ENST00000571442 TCHHQ07283 1943 aa7.84□□□□□ -1.16
SMG6-209ENST00000571442 COL6A3P12111 3177 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 IGKV6-21A0A0C4DH24 114 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 SMIM35A0A1B0GVV1 85 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 DDX11L8A8MPP1 907 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 GRXCR1A8MXD5 290 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 RSPH10B2B2RC85 870 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 F13A1P00488 732 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 CXCL10P02778 98 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 VTNP04004 478 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 RSPH10BP0C881 870 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 ZSCAN22P10073 491 aaPredicted RBP7.83□□□□□ -1.16
SMG6-209ENST00000571442 GNAT1P11488 350 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 PDCP20941 246 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 YWHABP31946 246 aaKnown RBP7.83□□□□□ -1.16
SMG6-209ENST00000571442 CEBPZQ03701 1054 aaKnown RBP7.83□□□□□ -1.16
SMG6-209ENST00000571442 PPIGQ13427 754 aaKnown RBP eCLIP7.83□□□□□ -1.165e-6■■□□□ 13.2
SMG6-209ENST00000571442 FOXD4L6Q3SYB3 417 aaPredicted RBP7.83□□□□□ -1.16
SMG6-209ENST00000571442 XKR3Q5GH77 459 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 RASIP1Q5U651 963 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 POTEGQ6S5H5 508 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 FOXD4L3Q6VB84 417 aaPredicted RBP7.83□□□□□ -1.16
SMG6-209ENST00000571442 OTOP2Q7RTS6 562 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 KCNK18Q7Z418 384 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 TMCO2Q7Z6W1 182 aaPredicted RBP7.83□□□□□ -1.16
SMG6-209ENST00000571442 RPAINQ86UA6 219 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 TDHQ8IZJ6 230 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 TMEM199Q8N511 208 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 FAM167AQ96KS9 214 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 PNMA5Q96PV4 448 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 AGO3Q9H9G7 860 aaKnown RBP7.83□□□□□ -1.16
SMG6-209ENST00000571442 XPNPEP1Q9NQW7 623 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 CYP26B1Q9NR63 512 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 CDY2AQ9Y6F7 541 aa7.83□□□□□ -1.16
SMG6-209ENST00000571442 VWA3AA6NCI4 1184 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 GPR32O75388 356 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 LYPLA2O95372 231 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 BRD1O95696 1058 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 HSP90AA1P07900 732 aaKnown RBP7.82□□□□□ -1.16
SMG6-209ENST00000571442 GHRP10912 638 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 MARCKSP29966 332 aaPredicted RBP7.82□□□□□ -1.16
SMG6-209ENST00000571442 DDIT3P35638 169 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 PRPHP41219 470 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 RARRES1P49788 294 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 MRPS6P82932 125 aaKnown RBP7.82□□□□□ -1.16
SMG6-209ENST00000571442 LPIN1Q14693 890 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 PLEKHG4Q58EX7 1191 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 SPECC1Q5M775 1068 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 FBXO47Q5MNV8 452 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 EFCAB12Q6NXP0 572 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 TAF2Q6P1X5 1199 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 USP49Q70CQ1 688 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 KSR1Q8IVT5 923 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 DEFB123Q8N688 67 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 METTL13Q8N6R0 699 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 RETREG2Q8NC44 543 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 SLC17A8Q8NDX2 589 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 DBF4BQ8NFT6 615 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 LINC01599Q8WXQ3 324 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 HERVK_113Q902F9 699 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 CLIC6Q96NY7 704 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms