RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 RNASELQ05823 741 aaKnown RBP16.55■□□□□ 0.24
CIITA-204ENST00000570546 NAALADL2Q58DX5 795 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 C12orf60Q5U649 245 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 USP49Q70CQ1 688 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 FAM20AQ96MK3 541 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 TRIM9Q9C026 710 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 FRMD3A2A2Y4 597 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 GH2P01242 217 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 MMEP08473 750 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 SRGNP10124 158 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 NPR1P16066 1061 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 GCKP35557 465 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 CACNB3P54284 484 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.24
CIITA-204ENST00000570546 FUCA2Q9BTY2 467 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 ZNF335Q9H4Z2 1342 aaPredicted RBP16.55■□□□□ 0.24
CIITA-204ENST00000570546 A6NJR5 290 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 IRX4P78413 519 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 DNAJC17Q9NVM6 304 aaKnown RBP16.55■□□□□ 0.24
CIITA-204ENST00000570546 ZNF185O15231 689 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 CRKP46108 304 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 PEX3P56589 373 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 SPATA4Q8NEY3 305 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 NSMCE1Q8WV22 266 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 GPC5P78333 572 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 NEDD1Q8NHV4 660 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 CDKL2Q92772 493 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 DYDC2Q96IM9 177 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 JPH2Q9BR39 696 aaPredicted RBP16.54■□□□□ 0.24
CIITA-204ENST00000570546 TXLNGQ9NUQ3 528 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 SNX12Q9UMY4 172 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 MCF2LO15068 1137 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 IGBP1P78318 339 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 MTERF2Q49AM1 385 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 RBM43Q6ZSC3 357 aaKnown RBP16.54■□□□□ 0.24
CIITA-204ENST00000570546 ELOA2Q8IYF1 753 aaPredicted RBP16.54■□□□□ 0.24
CIITA-204ENST00000570546 RIOK1Q9BRS2 568 aaKnown RBP16.54■□□□□ 0.24
CIITA-204ENST00000570546 TAF1DQ9H5J8 278 aaPredicted RBP16.54■□□□□ 0.24
CIITA-204ENST00000570546 CAPN9O14815 690 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 GIPC1O14908 333 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 PSAPP07602 524 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 PPP2R5CQ13362 524 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 HIBCHQ6NVY1 386 aaPredicted RBP16.54■□□□□ 0.24
CIITA-204ENST00000570546 PDZD4Q76G19 769 aaPredicted RBP16.54■□□□□ 0.24
CIITA-204ENST00000570546 NME8Q8N427 588 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 BANK1Q8NDB2 785 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 ZNF408Q9H9D4 720 aa16.54■□□□□ 0.24
CIITA-204ENST00000570546 GARSP41250 739 aaKnown RBP16.53■□□□□ 0.24
CIITA-204ENST00000570546 NXNQ6DKJ4 435 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 RUBCNQ92622 972 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 HPS3Q969F9 1004 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 CALR3Q96L12 384 aaKnown RBP16.53■□□□□ 0.24
CIITA-204ENST00000570546 POLD4Q9HCU8 107 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 ADGRB2O60241 1585 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 RHOBTB3O94955 611 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 EIF2AK2P19525 551 aaKnown RBP16.53■□□□□ 0.24
CIITA-204ENST00000570546 MIGA2Q7L4E1 593 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 ELAC2Q9BQ52 826 aaKnown RBP16.53■□□□□ 0.24
CIITA-204ENST00000570546 LRRC1Q9BTT6 524 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 EDEM3Q9BZQ6 932 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 DDX47Q9H0S4 455 aaKnown RBP16.53■□□□□ 0.24
CIITA-204ENST00000570546 ADAMTS13Q76LX8 1427 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 LRRD1A4D1F6 860 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 CASQ2O14958 399 aaPredicted RBP16.53■□□□□ 0.24
CIITA-204ENST00000570546 MAGOHP61326 146 aaKnown RBP16.53■□□□□ 0.24
CIITA-204ENST00000570546 GRM1Q13255 1194 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 RCSD1Q6JBY9 416 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 CDHR1Q96JP9 859 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 C7orf25Q9BPX7 421 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 NUF2Q9BZD4 464 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 INTS2Q9H0H0 1204 aaKnown RBP16.53■□□□□ 0.24
CIITA-204ENST00000570546 TRIM10Q9UDY6 481 aa16.53■□□□□ 0.24
CIITA-204ENST00000570546 NEURL4Q96JN8 1562 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 M0QZ92 97 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 PLS3P13797 630 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 CYP2C19P33261 490 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 BASP1P80723 227 aaKnown RBP16.52■□□□□ 0.24
CIITA-204ENST00000570546 TFAMQ00059 246 aaKnown RBP16.52■□□□□ 0.24
CIITA-204ENST00000570546 ZNF34Q8IZ26 560 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 NOC2LQ9Y3T9 749 aaKnown RBP16.52■□□□□ 0.24
CIITA-204ENST00000570546 C1orf167Q5SNV9 1468 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 GCLMP48507 274 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 PMS2P54278 862 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 DRAP1Q14919 205 aaPredicted RBP16.52■□□□□ 0.24
CIITA-204ENST00000570546 ZBTB33Q86T24 672 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 TRIM42Q8IWZ5 723 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 ZNF710Q8N1W2 664 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 KCTD6Q8NC69 237 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 ATP6V1G3Q96LB4 118 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 NOD1Q9Y239 953 aa16.52■□□□□ 0.24
CIITA-204ENST00000570546 DEPDC5O75140 1603 aa16.52■□□□□ 0.23
CIITA-204ENST00000570546 MED7O43513 233 aa16.52■□□□□ 0.23
CIITA-204ENST00000570546 MT-ND3P03897 115 aa16.52■□□□□ 0.23
CIITA-204ENST00000570546 GYPCP04921 128 aa16.52■□□□□ 0.23
CIITA-204ENST00000570546 GUCY2CP25092 1073 aa16.52■□□□□ 0.23
CIITA-204ENST00000570546 QRICH1Q2TAL8 776 aa16.52■□□□□ 0.23
CIITA-204ENST00000570546 MIPOL1Q8TD10 442 aa16.52■□□□□ 0.23
CIITA-204ENST00000570546 KAZALD1Q96I82 304 aa16.52■□□□□ 0.23
CIITA-204ENST00000570546 SCYL1Q96KG9 808 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms