RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SEPT1Q8WYJ6 367 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 GLG1Q92896 1179 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 PIGSQ96S52 555 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 ADAM2Q99965 735 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 RTP3Q9BQQ7 232 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 SMARCAD1Q9H4L7 1026 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 ERVK-5Q9HDB9 667 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 PCDHA2Q9Y5H9 948 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 R4GN57 208 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 MAP1BP46821 2468 aaKnown RBP12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 KDM3AQ9Y4C1 1321 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 CFAP47Q6ZTR5 3102 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 CACNA1IQ9P0X4 2223 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 RRN3P2A6NIE6 340 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 C9IYK1 514 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 CLASP2O75122 1294 aaKnown RBP12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 FGFR1P11362 822 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 KCNA2P16389 499 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 PDE4AP27815 886 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 NT5C2P49902 561 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 RARS2Q5T160 578 aaKnown RBP12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 PCNX4Q63HM2 1172 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 LRRC55Q6ZSA7 311 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 TMC7Q7Z402 723 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 POTEDQ86YR6 584 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 DCLK2Q8N568 766 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 CYP2W1Q8TAV3 490 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 FEZF2Q8TBJ5 459 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 TRAPPC12Q8WVT3 735 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 RIOX1Q9H6W3 641 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 RGS18Q9NS28 235 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 USTQ9Y2C2 406 aa12.03□□□□□ -0.48
CTDNEP1-202ENST00000570380 C2orf71A6NGG8 1288 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 CYTH3O43739 400 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 EOMESO95936 686 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 PBX3P40426 434 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 KRT76Q01546 638 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 TRAF1Q13077 416 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 KIAA1841Q6NSI8 718 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 KCNT2Q6UVM3 1135 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 SLC24A5Q71RS6 500 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 NLRX1Q86UT6 975 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 SIX5Q8N196 739 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 MRPL43Q8N983 215 aaKnown RBP12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 PCYT2Q99447 389 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 CDHR5Q9HBB8 845 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 CYP26B1Q9NR63 512 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 C1orf112Q9NSG2 853 aa12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 DBR1Q9UK59 544 aaKnown RBP12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 NOC2LQ9Y3T9 749 aaKnown RBP12.02□□□□□ -0.49
CTDNEP1-202ENST00000570380 DENND3A2RUS2 1198 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 RPS6KA5O75582 802 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 FAM189BP81408 668 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 KRT17Q04695 432 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 TDGQ13569 410 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 SMC1AQ14683 1233 aaKnown RBP12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 SEC23AQ15436 765 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 RSPO4Q2I0M5 234 aaPredicted RBP12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 ATAT1Q5SQI0 421 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 IFIT1BQ5T764 474 aaKnown RBP12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 NME8Q8N427 588 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 TMEM40Q8WWA1 233 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 HINFPQ9BQA5 517 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 ATP6V0A4Q9HBG4 840 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 TMEM161AQ9NX61 479 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 DUSP12Q9UNI6 340 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 ST3GAL5Q9UNP4 418 aa12.01□□□□□ -0.49
CTDNEP1-202ENST00000570380 PNMA6FA0A0J9YX94 578 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 SMIM35A0A1B0GVV1 85 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 PLCB4Q15147 1175 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 XRRA1Q6P2D8 792 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 USP17L6PQ6QN14 398 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 RIN2Q8WYP3 895 aaPredicted RBP12□□□□□ -0.49
CTDNEP1-202ENST00000570380 RUBCNQ92622 972 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 GPRASP2Q96D09 838 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 ZNF558Q96NG5 402 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 CASD1Q96PB1 797 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 UBAC1Q9BSL1 405 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 TMEM117Q9H0C3 514 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 RNF19AQ9NV58 838 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 SPG21Q9NZD8 308 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 PKD2L1Q9P0L9 805 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 FBXL21Q9UKT6 434 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 GINS2Q9Y248 185 aa12□□□□□ -0.49
CTDNEP1-202ENST00000570380 MIA3Q5JRA6 1907 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 MYH9P35579 1960 aaKnown RBP11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 DOCK8Q8NF50 2099 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 EPCAMP16422 314 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 ITGB5P18084 799 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 PPM1AP35813 382 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 PDE1AP54750 535 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 GRM4Q14833 912 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 MTHFD1LQ6UB35 978 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 FAM43BQ6ZT52 329 aaPredicted RBP11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 TICAM2Q86XR7 235 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 SMARCC2Q8TAQ2 1214 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 ELAC1Q9H777 363 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms