RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 PPP2R2CQ9Y2T4 447 aa8.86□□□□□ -0.99
TCF4-246ENST00000570287 PCDHB6Q9Y5E3 794 aa8.86□□□□□ -0.99
TCF4-246ENST00000570287 A6NCN8 305 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 GABRDO14764 452 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 ARHGAP6O43182 974 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 N4BP1O75113 896 aaKnown RBP8.85□□□□□ -0.99
TCF4-246ENST00000570287 PRDM1O75626 825 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 BMP15O95972 392 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 DDR1Q08345 913 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 GALEQ14376 348 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 CNNM4Q6P4Q7 775 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 TMTC3Q6ZXV5 915 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 VIPAS39Q9H9C1 493 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 CABP5Q9NP86 173 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 DDX20Q9UHI6 824 aaKnown RBP8.85□□□□□ -0.99
TCF4-246ENST00000570287 LY75O60449 1722 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 TAF1LQ8IZX4 1826 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 GARTP22102 1010 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 PMLP29590 882 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 NT5DC1Q5TFE4 455 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 SH3RF1Q7Z6J0 888 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 RHOVQ96L33 236 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 STRIP2Q9ULQ0 834 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 PCDHA5Q9Y5H7 936 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 TRIM75PA6NK02 468 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 CBFA2T2O43439 604 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 RHOBTB3O94955 611 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 PLEKHA8P1O95397 391 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 JUNDP17535 347 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 PRDX5P30044 214 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 HNRNPH1P31943 449 aaKnown RBP8.85□□□□□ -0.99
TCF4-246ENST00000570287 PDE4BQ07343 736 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 ISM2Q6H9L7 571 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 LVRNQ6Q4G3 990 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 SRGAP1Q7Z6B7 1085 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 FOXP4Q8IVH2 680 aaPredicted RBP8.85□□□□□ -0.99
TCF4-246ENST00000570287 CTCFLQ8NI51 663 aaPredicted RBP8.85□□□□□ -0.99
TCF4-246ENST00000570287 FOXJ1Q92949 421 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 SHISA4Q96DD7 197 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 VPS54Q9P1Q0 977 aa8.85□□□□□ -0.99
TCF4-246ENST00000570287 POLR2DO15514 142 aaKnown RBP8.84□□□□□ -0.99
TCF4-246ENST00000570287 PRPF6O94906 941 aaKnown RBP8.84□□□□□ -0.99
TCF4-246ENST00000570287 TNFAIP3P21580 790 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 POSTNQ15063 836 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 CCDC70Q6NSX1 233 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 TRIML1Q8N9V2 468 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 TRHDEQ9UKU6 1024 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 TNRC6CQ9HCJ0 1690 aaKnown RBP8.84□□□□□ -0.99
TCF4-246ENST00000570287 ERLIN2O94905 339 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 PF4P02776 101 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 TUBBP07437 444 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 USP8P40818 1118 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 RBM5P52756 815 aaKnown RBP eCLIP8.84□□□□□ -0.99
TCF4-246ENST00000570287 GRIN1Q05586 938 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 TBX2Q13207 712 aaPredicted RBP8.84□□□□□ -0.99
TCF4-246ENST00000570287 GRAPQ13588 217 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 TUBB2AQ13885 445 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 MORC3Q14149 939 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 SPECC1Q5M775 1068 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 DZIP1Q86YF9 867 aaKnown RBP8.84□□□□□ -0.99
TCF4-246ENST00000570287 WDR66Q8TBY9 1149 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 GRAPLQ8TC17 118 aaPredicted RBP8.84□□□□□ -0.99
TCF4-246ENST00000570287 DHX58Q96C10 678 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 PNKPQ96T60 521 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 TUBB2BQ9BVA1 445 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 SUDS3Q9H7L9 328 aaPredicted RBP8.84□□□□□ -0.99
TCF4-246ENST00000570287 SUN2Q9UH99 717 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 DACH1Q9UI36 760 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 USP21Q9UK80 565 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 CNTNAP5Q8WYK1 1306 aa8.84□□□□□ -0.99
TCF4-246ENST00000570287 hCG_1642624A0A1W2PR95 340 aa8.83□□□□□ -1
TCF4-246ENST00000570287 POTEFA5A3E0 1075 aa8.83□□□□□ -1
TCF4-246ENST00000570287 ERLIN1O75477 346 aa8.83□□□□□ -1
TCF4-246ENST00000570287 RFC4P35249 363 aa8.83□□□□□ -1
TCF4-246ENST00000570287 SARSP49591 514 aaKnown RBP8.83□□□□□ -1
TCF4-246ENST00000570287 TRAPPC3LQ5T215 181 aa8.83□□□□□ -1
TCF4-246ENST00000570287 LRCH2Q5VUJ6 765 aa8.83□□□□□ -1
TCF4-246ENST00000570287 TXNRD3Q86VQ6 643 aa8.83□□□□□ -1
TCF4-246ENST00000570287 VSTM4Q8IW00 320 aa8.83□□□□□ -1
TCF4-246ENST00000570287 CCDC24Q8N4L8 307 aa8.83□□□□□ -1
TCF4-246ENST00000570287 C3orf58Q8NDZ4 430 aa8.83□□□□□ -1
TCF4-246ENST00000570287 TBC1D22AQ8WUA7 517 aa8.83□□□□□ -1
TCF4-246ENST00000570287 ZBTB21Q9ULJ3 1066 aa8.83□□□□□ -1
TCF4-246ENST00000570287 RENBPP51606 427 aa8.83□□□□□ -1
TCF4-246ENST00000570287 GSTO1P78417 241 aa8.83□□□□□ -1
TCF4-246ENST00000570287 CASP8Q14790 479 aa8.83□□□□□ -1
TCF4-246ENST00000570287 AMIGO3Q86WK7 504 aa8.83□□□□□ -1
TCF4-246ENST00000570287 MLKLQ8NB16 471 aa8.83□□□□□ -1
TCF4-246ENST00000570287 LSM14AQ8ND56 463 aaKnown RBP8.83□□□□□ -1
TCF4-246ENST00000570287 NELL1Q92832 810 aa8.83□□□□□ -1
TCF4-246ENST00000570287 TNFRSF25Q93038 417 aa8.83□□□□□ -1
TCF4-246ENST00000570287 FERMT2Q96AC1 680 aa8.83□□□□□ -1
TCF4-246ENST00000570287 TRMT2BQ96GJ1 504 aaKnown RBP8.83□□□□□ -1
TCF4-246ENST00000570287 CSRNP2Q9H175 543 aa8.83□□□□□ -1
TCF4-246ENST00000570287 NUCKS1Q9H1E3 243 aaKnown RBP8.83□□□□□ -1
TCF4-246ENST00000570287 MAN1B1Q9UKM7 699 aa8.83□□□□□ -1
TCF4-246ENST00000570287 TSPY2A6NKD2 308 aa8.83□□□□□ -1
TCF4-246ENST00000570287 FOXN1O15353 648 aa8.83□□□□□ -1
TCF4-246ENST00000570287 ACTN4O43707 911 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms