RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	ALKBH5	Q6P6C2	394 aa	Known RBP	13.85	□□□□□ -0.19
PKM-222	ENST00000568883	CHURC1	Q8WUH1	139 aa		13.85	□□□□□ -0.19
PKM-222	ENST00000568883	HDAC7	Q8WUI4	952 aa		13.85	□□□□□ -0.19
PKM-222	ENST00000568883	CNKSR1	Q969H4	720 aa		13.85	□□□□□ -0.19
PKM-222	ENST00000568883	AKT1S1	Q96B36	256 aa		13.85	□□□□□ -0.19
PKM-222	ENST00000568883	CALR3	Q96L12	384 aa	Known RBP	13.85	□□□□□ -0.19
PKM-222	ENST00000568883	INPP4A	Q96PE3	977 aa	Predicted RBP	13.85	□□□□□ -0.19
PKM-222	ENST00000568883	CSRNP1	Q96S65	589 aa		13.85	□□□□□ -0.19
PKM-222	ENST00000568883	PARVG	Q9HBI0	331 aa		13.85	□□□□□ -0.19
PKM-222	ENST00000568883	KCNQ5	Q9NR82	932 aa		13.85	□□□□□ -0.19
PKM-222	ENST00000568883	GCNT4	Q9P109	453 aa		13.85	□□□□□ -0.19
PKM-222	ENST00000568883	NAGPA	Q9UK23	515 aa		13.85	□□□□□ -0.19
PKM-222	ENST00000568883	ODF2L	Q9ULJ1	636 aa		13.85	□□□□□ -0.19
PKM-222	ENST00000568883	MRPL11	Q9Y3B7	192 aa	Known RBP	13.85	□□□□□ -0.19
PKM-222	ENST00000568883	ARFGEF1	Q9Y6D6	1849 aa		13.85	□□□□□ -0.19
PKM-222	ENST00000568883	SHTN1	A0MZ66	631 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	PLSCR1	O15162	318 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	SHOX2	O60902	331 aa	Predicted RBP	13.84	□□□□□ -0.19
PKM-222	ENST00000568883	PPFIA4	O75335	1185 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	H2AFZ	P0C0S5	128 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	NOP2	P46087	812 aa	Known RBP	13.84	□□□□□ -0.19
PKM-222	ENST00000568883	PRELP	P51888	382 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	NPEPPS	P55786	919 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	ENOX2	Q16206	610 aa	Known RBP	13.84	□□□□□ -0.19
PKM-222	ENST00000568883	H2AFV	Q71UI9	128 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.84	□□□□□ -0.19
PKM-222	ENST00000568883	FAM186B	Q8IYM0	893 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	MREG	Q8N565	214 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	MYCT1	Q8N699	235 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	USP38	Q8NB14	1042 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	NEK9	Q8TD19	979 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	SLC35C1	Q96A29	364 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	NACC1	Q96RE7	527 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	P2RX7	Q99572	595 aa	Known RBP	13.84	□□□□□ -0.19
PKM-222	ENST00000568883	HSD17B14	Q9BPX1	270 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	RUSC1	Q9BVN2	902 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	FAM107B	Q9H098	131 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.84	□□□□□ -0.19	1e-7	■■■■□ 21.3
PKM-222	ENST00000568883	ADAMTSL1	Q8N6G6	1762 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	ATAD5	Q96QE3	1844 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	IGLV3-22	A0A075B6J6	115 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	KIF4A	O95239	1232 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	ACTN1	P12814	892 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	RFX1	P22670	979 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	HOXA13	P31271	388 aa	Predicted RBP	13.84	□□□□□ -0.19
PKM-222	ENST00000568883	HOXD13	P35453	343 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	JAM2	P57087	298 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	SNAP25	P60880	206 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	OTOP1	Q7RTM1	612 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	ACTRT1	Q8TDG2	376 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	SLC5A5	Q92911	643 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	MS4A14	Q96JA4	679 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	FRMD4B	Q9Y2L6	1034 aa		13.84	□□□□□ -0.19
PKM-222	ENST00000568883	SIPA1L1	O43166	1804 aa		13.83	□□□□□ -0.19
PKM-222	ENST00000568883	FRMPD4	Q14CM0	1322 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	CCDC188	H7C350	402 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	KCNK3	O14649	394 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	OPLAH	O14841	1288 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	GAS7	O60861	476 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	PSMD10	O75832	226 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	SLURP2	P0DP57	97 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	LMNB1	P20700	586 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	GUCY2D	Q02846	1103 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	PPP2R5A	Q15172	486 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.83	□□□□□ -0.2
PKM-222	ENST00000568883	CFAP58	Q5T655	872 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	DPY19L2P1	Q6NXN4	242 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	FAM160B2	Q86V87	743 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	TPH2	Q8IWU9	490 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	VTI1A	Q96AJ9	217 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	KRT12	Q99456	494 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	PACSIN1	Q9BY11	444 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	TDRD3	Q9H7E2	651 aa	Known RBP	13.83	□□□□□ -0.2
PKM-222	ENST00000568883	EPB41L5	Q9HCM4	733 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	SMARCAL1	Q9NZC9	954 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	EHD2	Q9NZN4	543 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	PCDHB13	Q9Y5F0	798 aa		13.83	□□□□□ -0.2
PKM-222	ENST00000568883	RSPH10B2	B2RC85	870 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	PGRMC1	O00264	195 aa	Known RBP	13.82	□□□□□ -0.2
PKM-222	ENST00000568883	EML1	O00423	815 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	PLA2G6	O60733	806 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	CFB	P00751	764 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	RSPH10B	P0C881	870 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	CUL1	Q13616	776 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	MYBPC2	Q14324	1141 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	CLUL1	Q15846	466 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	LRRC31	Q6UY01	552 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	C1orf186	Q6ZWK4	172 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	SRL	Q86TD4	932 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	RIN2	Q8WYP3	895 aa	Predicted RBP	13.82	□□□□□ -0.2
PKM-222	ENST00000568883	TMX2	Q9Y320	296 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	PCDHAC2	Q9Y5I4	1007 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	SLITRK3	O94933	977 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	ZNF131	P52739	623 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	ALCAM	Q13740	583 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	CTTN	Q14247	550 aa	Known RBP	13.82	□□□□□ -0.2
PKM-222	ENST00000568883	GRIPAP1	Q4V328	841 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	CEP55	Q53EZ4	464 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	PEX26	Q7Z412	305 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	FAM178B	Q8IXR5	827 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms