RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 MYH15Q9Y2K3 1946 aa11.32□□□□□ -0.6
PKM-221ENST00000568743 ALPK3Q96L96 1907 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 MBLAC1A4D2B0 266 aaPredicted RBP11.31□□□□□ -0.6
PKM-221ENST00000568743 TRIM43BA6NCK2 446 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 RRN3P2A6NIE6 340 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 DKC1O60832 514 aaKnown RBP eCLIP11.31□□□□□ -0.6
PKM-221ENST00000568743 PPP6R2O75170 966 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 C22orf31O95567 290 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 GNAT1P11488 350 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 KLRC1P26715 233 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 UBA7P41226 1012 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 ADAM17P78536 824 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 GRB10Q13322 594 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 KARSQ15046 597 aaKnown RBP11.31□□□□□ -0.6
PKM-221ENST00000568743 XKR9Q5GH70 373 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 ZNF484Q5JVG2 852 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 MTHFD1LQ6UB35 978 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 KCNK18Q7Z418 384 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 SERINC5Q86VE9 423 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 LRRC71Q8N4P6 559 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 RASSF8Q8NHQ8 419 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 SYMPKQ92797 1274 aaKnown RBP11.31□□□□□ -0.6
PKM-221ENST00000568743 TRIM43Q96BQ3 446 aaPredicted RBP11.31□□□□□ -0.6
PKM-221ENST00000568743 CEP170P1Q96L14 293 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 AK8Q96MA6 479 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 PNMA5Q96PV4 448 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 CEP89Q96ST8 783 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 NIFKQ9BYG3 293 aaKnown RBP11.31□□□□□ -0.6
PKM-221ENST00000568743 PPP1R12CQ9BZL4 782 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 FAM49AQ9H0Q0 323 aaPredicted RBP11.31□□□□□ -0.6
PKM-221ENST00000568743 CYP26B1Q9NR63 512 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 KIAA1024Q9UPX6 916 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 MORC2Q9Y6X9 1032 aaPredicted RBP11.31□□□□□ -0.6
PKM-221ENST00000568743 UMODL1Q5DID0 1318 aa11.31□□□□□ -0.6
PKM-221ENST00000568743 COL1A2P08123 1366 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 E9PMD0 336 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 CUTAO60888 179 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 LYPLA2O95372 231 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 ITGB8P26012 769 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 CLCN3P51790 818 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 MLLT1Q03111 559 aaPredicted RBP11.3□□□□□ -0.6
PKM-221ENST00000568743 PTK7Q13308 1070 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 TARBP2Q15633 366 aaKnown RBP11.3□□□□□ -0.6
PKM-221ENST00000568743 TMEM119Q4V9L6 283 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 AXDND1Q5T1B0 1012 aaPredicted RBP11.3□□□□□ -0.6
PKM-221ENST00000568743 OTUD6AQ7L8S5 288 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 METTL13Q8N6R0 699 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 TNPO1Q92973 898 aaKnown RBP11.3□□□□□ -0.6
PKM-221ENST00000568743 CDK5RAP3Q96JB5 506 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 CCDC43Q96MW1 224 aaKnown RBP11.3□□□□□ -0.6
PKM-221ENST00000568743 NACC1Q96RE7 527 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
PKM-221ENST00000568743 PANK2Q9BZ23 570 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 SCAND2PQ9GZW5 306 aaPredicted RBP11.3□□□□□ -0.6
PKM-221ENST00000568743 HIPK3Q9H422 1215 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 TBX21Q9UL17 535 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 STK24Q9Y6E0 443 aa11.3□□□□□ -0.6
PKM-221ENST00000568743 USO1O60763 962 aaKnown RBP11.29□□□□□ -0.6
PKM-221ENST00000568743 CTSHP09668 335 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 PLCG1P19174 1290 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 CYP2C18P33260 490 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 THPOP40225 353 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 RARRES1P49788 294 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 CCL23P55773 120 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 TBC1D8BQ0IIM8 1120 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 TMEM62Q0P6H9 643 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 TRIM71Q2Q1W2 868 aaKnown RBP11.29□□□□□ -0.6
PKM-221ENST00000568743 HYIQ5T013 277 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 SHC4Q6S5L8 630 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 LRRC15Q8TF66 581 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 DNAJB3Q8WWF6 145 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 CALML4Q96GE6 196 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 PPP1R16BQ96T49 567 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 BHMT2Q9H2M3 363 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 SUGCTQ9HAC7 445 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 ANKEF1Q9NU02 776 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 PRKAG2Q9UGJ0 569 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 PCDHA2Q9Y5H9 948 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 KDM3AQ9Y4C1 1321 aa11.29□□□□□ -0.6
PKM-221ENST00000568743 TNRC18O15417 2968 aaPredicted RBP11.28□□□□□ -0.6
PKM-221ENST00000568743 A0A087X0B3 334 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 ARHGEF35A5YM69 484 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 KIAA0355O15063 1070 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
PKM-221ENST00000568743 CKBP12277 381 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 RAG1P15918 1043 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 MUTP22033 750 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 TXLNAP40222 546 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 POLGP54098 1239 aaPredicted RBP11.28□□□□□ -0.6
PKM-221ENST00000568743 DRP2Q13474 957 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 BFSP2Q13515 415 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 DHX8Q14562 1220 aaKnown RBP11.28□□□□□ -0.6
PKM-221ENST00000568743 ZNF618Q5T7W0 954 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 EFCAB12Q6NXP0 572 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 TAF2Q6P1X5 1199 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 MAEAQ7L5Y9 396 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 KIAA0319LQ8IZA0 1049 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 PDILTQ8N807 584 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 SCLYQ96I15 445 aa11.28□□□□□ -0.6
PKM-221ENST00000568743 ZNF668Q96K58 619 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms