RNA–Protein interactions for RNA: ENST00000568632.5

CDH16-207, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-207ENST00000568632 SLC45A1Q9Y2W3 748 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 A0A087WUV0 522 aaPredicted RBP17.06■□□□□ 0.32
CDH16-207ENST00000568632 IGF2BP3O00425 579 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDH16-207ENST00000568632 MED24O75448 989 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 ECM2O94769 699 aaPredicted RBP17.06■□□□□ 0.32
CDH16-207ENST00000568632 SLC25A27O95847 323 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 CCND2P30279 289 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 CYP4A11Q02928 519 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 GPRC5AQ8NFJ5 357 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 HPCAL4Q9UM19 191 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 ITIH6Q6UXX5 1313 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 RNF225M0QZC1 329 aaPredicted RBP17.06■□□□□ 0.32
CDH16-207ENST00000568632 ATP9AO75110 1047 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 ITGB3BPQ13352 177 aaPredicted RBP17.06■□□□□ 0.32
CDH16-207ENST00000568632 TADA2BQ86TJ2 420 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 AGO4Q9HCK5 861 aaKnown RBP17.06■□□□□ 0.32
CDH16-207ENST00000568632 BLOC1S4Q9NUP1 217 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 KIAA1024Q9UPX6 916 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 TLL2Q9Y6L7 1015 aa17.06■□□□□ 0.32
CDH16-207ENST00000568632 POTEFA5A3E0 1075 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 SOWAHBA6NEL2 793 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 RGS20O76081 388 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 DPYDQ12882 1025 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 FILIP1LQ4L180 1135 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 KLHL10Q6JEL2 608 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 POTEGQ6S5H5 508 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 CATSPER3Q86XQ3 398 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 NCAPGQ9BPX3 1015 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 UNC45AQ9H3U1 944 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 BCRP11274 1271 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 PARK7Q99497 189 aaKnown RBP17.05■□□□□ 0.32
CDH16-207ENST00000568632 MMP19Q99542 508 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 KBTBD4Q9NVX7 518 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 RGL1Q9NZL6 768 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 SYNRGQ9UMZ2 1314 aa17.05■□□□□ 0.32
CDH16-207ENST00000568632 ALDH5A1P51649 535 aaPredicted RBP17.04■□□□□ 0.32
CDH16-207ENST00000568632 KCTD2Q14681 263 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 TMEM119Q4V9L6 283 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 NIPA1Q7RTP0 329 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 TRAPPC11Q7Z392 1133 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 ZIC5Q96T25 663 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 ABHD10Q9NUJ1 306 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 DHX15O43143 795 aaKnown RBP17.04■□□□□ 0.32
CDH16-207ENST00000568632 SHOX2O60902 331 aaPredicted RBP17.04■□□□□ 0.32
CDH16-207ENST00000568632 SLC10A3P09131 477 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 SPATA31C1P0DKV0 1188 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 CYP26C1Q6V0L0 522 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 MMS22LQ6ZRQ5 1243 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 PAXIP1Q6ZW49 1069 aaPredicted RBP17.04■□□□□ 0.32
CDH16-207ENST00000568632 FAM133AQ8N9E0 248 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 RIN2Q8WYP3 895 aaPredicted RBP17.04■□□□□ 0.32
CDH16-207ENST00000568632 DEF6Q9H4E7 631 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 MROH8Q9H579 483 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 BCAS3Q9H6U6 928 aa17.04■□□□□ 0.32
CDH16-207ENST00000568632 FAM155AB1AL88 458 aaPredicted RBP17.03■□□□□ 0.32
CDH16-207ENST00000568632 PPP1R3GB7ZBB8 358 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 E9PMD0 336 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
CDH16-207ENST00000568632 SORBS3O60504 671 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 SEMA3FQ13275 785 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 PPP2R5CQ13362 524 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 DNERQ8NFT8 737 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 COG1Q8WTW3 980 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 LARP4BQ92615 738 aaKnown RBP17.03■□□□□ 0.32
CDH16-207ENST00000568632 INPP4AQ96PE3 977 aaPredicted RBP17.03■□□□□ 0.32
CDH16-207ENST00000568632 EIF2AK1Q9BQI3 630 aaKnown RBP17.03■□□□□ 0.32
CDH16-207ENST00000568632 TEKT3Q9BXF9 490 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 LRRC10BA6NIK2 292 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 TOMM70O94826 608 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 FCER1AP12319 257 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 GCLCP48506 637 aaPredicted RBP17.03■□□□□ 0.32
CDH16-207ENST00000568632 PSMC6P62333 389 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 CTTNQ14247 550 aaKnown RBP17.03■□□□□ 0.32
CDH16-207ENST00000568632 SWT1Q5T5J6 900 aaKnown RBP17.03■□□□□ 0.32
CDH16-207ENST00000568632 HAUS3Q68CZ6 603 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 ERMNQ8TAM6 284 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 GTF3C2Q8WUA4 911 aaPredicted RBP17.03■□□□□ 0.32
CDH16-207ENST00000568632 RIT2Q99578 217 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 CPA4Q9UI42 421 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 CENPFP49454 3210 aa17.03■□□□□ 0.32
CDH16-207ENST00000568632 MANSC4A6NHS7 340 aaPredicted RBP17.02■□□□□ 0.32
CDH16-207ENST00000568632 TMEM88BA6NKF7 163 aa17.02■□□□□ 0.32
CDH16-207ENST00000568632 XRRA1Q6P2D8 792 aa17.02■□□□□ 0.32
CDH16-207ENST00000568632 EEPD1Q7L9B9 569 aa17.02■□□□□ 0.32
CDH16-207ENST00000568632 SMYD4Q8IYR2 804 aaPredicted RBP17.02■□□□□ 0.32
CDH16-207ENST00000568632 RAD54LQ92698 747 aa17.02■□□□□ 0.32
CDH16-207ENST00000568632 FGD4Q96M96 766 aa17.02■□□□□ 0.32
CDH16-207ENST00000568632 MMS19Q96T76 1030 aa17.02■□□□□ 0.32
CDH16-207ENST00000568632 CUEDC2Q9H467 287 aa17.02■□□□□ 0.32
CDH16-207ENST00000568632 REXO2Q9Y3B8 237 aaKnown RBP17.02■□□□□ 0.32
CDH16-207ENST00000568632 LOC102724159A0A0B4J2E5 919 aa17.02■□□□□ 0.31
CDH16-207ENST00000568632 AGPSO00116 658 aa17.02■□□□□ 0.31
CDH16-207ENST00000568632 SSBP05455 408 aaKnown RBP eCLIP17.02■□□□□ 0.31
CDH16-207ENST00000568632 MCM3P25205 808 aa17.02■□□□□ 0.31
CDH16-207ENST00000568632 RPA1P27694 616 aa17.02■□□□□ 0.31
CDH16-207ENST00000568632 COPB2P35606 906 aa17.02■□□□□ 0.31
CDH16-207ENST00000568632 CCNA1P78396 465 aa17.02■□□□□ 0.31
CDH16-207ENST00000568632 STIM1Q13586 685 aa17.02■□□□□ 0.31
CDH16-207ENST00000568632 PWP2Q15269 919 aaKnown RBP17.02■□□□□ 0.31
CDH16-207ENST00000568632 STXBP2Q15833 593 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms