RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 HNRNPH1P31943 449 aaKnown RBP9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 GALCP54803 685 aa9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 PPP4CP60510 307 aa9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 ICA1Q05084 483 aa9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 UBAP2Q5T6F2 1119 aaKnown RBP9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 ALS2CLQ60I27 953 aa9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 CPNE8Q86YQ8 564 aa9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 MRRFQ96E11 262 aaKnown RBP9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 INPP4AQ96PE3 977 aaPredicted RBP9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 ADAM33Q9BZ11 813 aa9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 LRRC27Q9C0I9 530 aa9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 NT5C3AQ9H0P0 336 aa9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 HOMER2Q9NSB8 354 aa9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 CD2APQ9Y5K6 639 aa9.77□□□□□ -0.85
HDGFL3-206ENST00000568294 EML1O00423 815 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 CDK17Q00537 523 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 SETQ01105 290 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 MESDQ14696 234 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 LRRC14Q15048 493 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 QPCTQ16769 361 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 CERKLQ49MI3 558 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 C2CD6Q53TS8 623 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 ZFYVE27Q5T4F4 411 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 GBP6Q6ZN66 633 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 BANK1Q8NDB2 785 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 THOC1Q96FV9 657 aaKnown RBP9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 CABS1Q96KC9 395 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 TAF1DQ9H5J8 278 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 CTTNBP2NLQ9P2B4 639 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 PNMA2Q9UL42 364 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 IGSF9BQ9UPX0 1349 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 PLCH1Q4KWH8 1693 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 BCORQ6W2J9 1755 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 TMEM150BA6NC51 233 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 EVI5O60447 810 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 SHMT1P34896 483 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 SNX1Q13596 522 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 KNOP1Q1ED39 458 aaKnown RBP9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 CCDC121Q6ZUS5 278 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 FAM186BQ8IYM0 893 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 KIRREL3Q8IZU9 778 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 ERMNQ8TAM6 284 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 MYCBPAPQ8TBZ2 947 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 PIK3R5Q8WYR1 880 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 RBM17Q96I25 401 aaKnown RBP9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 GANQ9H2C0 597 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 RABGAP1Q9Y3P9 1069 aa9.76□□□□□ -0.85
HDGFL3-206ENST00000568294 CLRN2A0PK11 232 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 DDTLA6NHG4 134 aaPredicted RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 EXOC3O60645 756 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 FGFR4P22455 802 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 HNRNPH3P31942 346 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 SSR1P43307 286 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 KCNJ1P48048 391 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 GIT2Q14161 759 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 DRAP1Q14919 205 aaPredicted RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 PTGISQ16647 500 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 ZCWPW2Q504Y3 356 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 MEX3CQ5U5Q3 659 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 CDC42EP5Q6NZY7 148 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 SLF2Q8IX21 1173 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 CTNNBL1Q8WYA6 563 aaPredicted RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 ARHGEF26Q96DR7 871 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 DYDC2Q96IM9 177 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 DNAJC12Q9UKB3 198 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 PPP1R9AQ9ULJ8 1098 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 LOC102724159A0A0B4J2E5 919 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 EIF4E1BA6NMX2 242 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 DDX3XO00571 662 aaKnown RBP eCLIP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 RPS6KA5O75582 802 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 SHBGP04278 402 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 TNFAIP3P21580 790 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 ATP2B4P23634 1241 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 PDE6BP35913 854 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 MDH1P40925 334 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 STAT1P42224 750 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 MARCKSL1P49006 195 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 PDIA5Q14554 519 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 PWP2Q15269 919 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 SPRED3Q2MJR0 410 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 RNF10Q8N5U6 811 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 TPCN2Q8NHX9 752 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 SLC20A1Q8WUM9 679 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 CCDC127Q96BQ5 260 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 TBC1D31Q96DN5 1066 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 THAP2Q9H0W7 228 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 KCTD10Q9H3F6 313 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 GDF3Q9NR23 364 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 CNOT8Q9UFF9 292 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 TSKSQ9UJT2 592 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 AMFRQ9UKV5 643 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 UTP11Q9Y3A2 253 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 KDM3AQ9Y4C1 1321 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 DOCK2Q92608 1830 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 CALUO43852 315 aaPredicted RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 GH2P01242 217 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 VIMP08670 466 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 CDR1P51861 262 aa9.75□□□□□ -0.85
HDGFL3-206ENST00000568294 UAP1Q16222 522 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms