RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 GGPS1O95749 300 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 SYF2O95926 243 aaKnown RBP8.34□□□□□ -1.07
ATXN3-250ENST00000568290 MYZAPP0CAP1 466 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 KRT13P13646 458 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 NPR1P16066 1061 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 NR2F2P24468 414 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 KLRK1P26718 216 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 CIITAP33076 1130 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 NOP2P46087 812 aaKnown RBP8.34□□□□□ -1.07
ATXN3-250ENST00000568290 CORO7P57737 925 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 CYP27A1Q02318 531 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 C2orf54Q08AI8 447 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 KCNH2Q12809 1159 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 SLC15A2Q16348 729 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 PRR5LQ6MZQ0 368 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 PPP1R2P3Q6NXS1 205 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 KDM7AQ6ZMT4 941 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 YTHDF3Q7Z739 585 aaKnown RBP8.34□□□□□ -1.07
ATXN3-250ENST00000568290 HOOK3Q86VS8 718 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 CCDC50Q8IVM0 306 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 RHOT2Q8IXI1 618 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 PARP9Q8IXQ6 854 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 NLGN1Q8N2Q7 840 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 SUPT20HQ8NEM7 779 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 NLRP7Q8WX94 980 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 DNAJC19Q96DA6 116 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 GMCL1Q96IK5 515 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 TACO1Q9BSH4 297 aaKnown RBP8.34□□□□□ -1.07
ATXN3-250ENST00000568290 WDR11Q9BZH6 1224 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 UBA5Q9GZZ9 404 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 ISCUQ9H1K1 167 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 TAF1DQ9H5J8 278 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-250ENST00000568290 KCNMB3Q9NPA1 279 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 GPCPD1Q9NPB8 672 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 GDF3Q9NR23 364 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 TMOD2Q9NZR1 351 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 SUCLA2Q9P2R7 463 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-250ENST00000568290 HDAC6Q9UBN7 1215 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 SRP68Q9UHB9 627 aaKnown RBP8.34□□□□□ -1.07
ATXN3-250ENST00000568290 TCEAL9Q9UHQ7 104 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 HDAC9Q9UKV0 1011 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 AMFRQ9UKV5 643 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 ODF2LQ9ULJ1 636 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 DAGLAQ9Y4D2 1042 aa8.34□□□□□ -1.07
ATXN3-250ENST00000568290 NHSQ6T4R5 1651 aa8.34□□□□□ -1.08
ATXN3-250ENST00000568290 FAM187AA6NFU0 413 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 MIF4GDA9UHW6 222 aaKnown RBP8.33□□□□□ -1.08
ATXN3-250ENST00000568290 EIF3HO15372 352 aaKnown RBP eCLIP8.33□□□□□ -1.08
ATXN3-250ENST00000568290 SRGAP2O75044 1071 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 COBLO75128 1261 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 PHACTR2O75167 634 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 PALMO75781 387 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 FAM13AO94988 1023 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 HEXIM1O94992 359 aaKnown RBP8.33□□□□□ -1.08
ATXN3-250ENST00000568290 TDP2O95551 362 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 CYP3A4P08684 503 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 MAPTP10636 758 aaKnown RBP8.33□□□□□ -1.08
ATXN3-250ENST00000568290 SCP2P22307 547 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 ATP5DP30049 168 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 SREBF1P36956 1147 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 GTF2IP78347 998 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 ARHGAP4P98171 946 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 IKQ13123 557 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-250ENST00000568290 CERKLQ49MI3 558 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-250ENST00000568290 AGBL2Q5U5Z8 902 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 KLHDC7AQ5VTJ3 777 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 SLFN13Q68D06 897 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 CC2D2BQ6DHV5 1058 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 PEX26Q7Z412 305 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 TXNRD3Q86VQ6 643 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 UBL4BQ8N7F7 174 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 USP38Q8NB14 1042 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 SLC44A5Q8NCS7 719 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 BCAS4Q8TDM0 211 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 CHURC1Q8WUH1 139 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 MAIP1Q8WWC4 291 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 CTNNBL1Q8WYA6 563 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-250ENST00000568290 COA7Q96BR5 231 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 NACC1Q96RE7 527 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 CEP89Q96ST8 783 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.33□□□□□ -1.08
ATXN3-250ENST00000568290 LRRC1Q9BTT6 524 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 ZHX3Q9H4I2 956 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 TMEM206Q9H813 350 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 ARHGEF10LQ9HCE6 1279 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 TRIM10Q9UDY6 481 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 FEZ2Q9UHY8 353 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-250ENST00000568290 TTC7AQ9ULT0 858 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-250ENST00000568290 MYH8P13535 1937 aa8.33□□□□□ -1.08
ATXN3-250ENST00000568290 FRMPD2Q68DX3 1309 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-250ENST00000568290 RASSF10A6NK89 507 aa8.32□□□□□ -1.08
ATXN3-250ENST00000568290 TMCO5BA8MYB1 307 aa8.32□□□□□ -1.08
ATXN3-250ENST00000568290 PIK3CDO00329 1044 aa8.32□□□□□ -1.08
ATXN3-250ENST00000568290 NDUFAB1O14561 156 aa8.32□□□□□ -1.08
ATXN3-250ENST00000568290 SLC37A4O43826 429 aa8.32□□□□□ -1.08
ATXN3-250ENST00000568290 DKC1O60832 514 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATXN3-250ENST00000568290 ENTPD3O75355 529 aa8.32□□□□□ -1.08
ATXN3-250ENST00000568290 KIF4AO95239 1232 aa8.32□□□□□ -1.08
ATXN3-250ENST00000568290 UCHL3P15374 230 aa8.32□□□□□ -1.08
ATXN3-250ENST00000568290 VEGFAP15692 232 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms