RNA–Protein interactions for RNA: ENST00000567232.1

TNRC6A-212, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-212ENST00000567232 SSH3Q8TE77 659 aa9.77□□□□□ -0.85
TNRC6A-212ENST00000567232 MRPS27Q92552 414 aaKnown RBP9.77□□□□□ -0.85
TNRC6A-212ENST00000567232 NXPE3Q969Y0 559 aa9.77□□□□□ -0.85
TNRC6A-212ENST00000567232 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
TNRC6A-212ENST00000567232 DZANK1Q9NVP4 752 aa9.77□□□□□ -0.85
TNRC6A-212ENST00000567232 EPS15L1Q9UBC2 864 aa9.77□□□□□ -0.85
TNRC6A-212ENST00000567232 USP9YO00507 2555 aaPredicted RBP9.77□□□□□ -0.85
TNRC6A-212ENST00000567232 TTC3P53804 2025 aa9.77□□□□□ -0.85
TNRC6A-212ENST00000567232 C2orf71A6NGG8 1288 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 NKRFO15226 690 aaKnown RBP eCLIP9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 NCAM2O15394 837 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 TXNP10599 105 aaKnown RBP9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 ITPKBP27987 946 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 CNR2P34972 360 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 CA8P35219 290 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 MPLP40238 635 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 SATB1Q01826 763 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 PRKCQQ04759 706 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 PPP2R5DQ14738 602 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 UAP1L1Q3KQV9 507 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 GORABQ5T7V8 394 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 NAA16Q6N069 864 aaPredicted RBP9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 RASGRP2Q7LDG7 609 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 LRRC47Q8N1G4 583 aaKnown RBP9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 MRPL43Q8N983 215 aaKnown RBP9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 FRAT1Q92837 279 aaPredicted RBP9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 KIFC2Q96AC6 838 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 ZNF512BQ96KM6 892 aaPredicted RBP9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 TRIM4Q9C037 500 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 GPCPD1Q9NPB8 672 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 LRP2BPQ9P2M1 347 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 PUF60Q9UHX1 559 aaKnown RBP9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 NOP58Q9Y2X3 529 aaKnown RBP9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 NUMBLQ9Y6R0 609 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 KIAA1217Q5T5P2 1943 aa9.76□□□□□ -0.85
TNRC6A-212ENST00000567232 MGAQ8IWI9 3026 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 PCNX2A6NKB5 2137 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 H0Y626 953 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 TRIM16O95361 564 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 ARIH2O95376 493 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 GHRP10912 638 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 EEF2P13639 858 aaKnown RBP9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 AKR1B1P15121 316 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 CASTP20810 708 aaKnown RBP9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 IBSPP21815 317 aaPredicted RBP9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 USP5P45974 858 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 LY6DQ14210 128 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 HIST2H2BCQ6DN03 193 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 CHST3Q7LGC8 479 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 RAB44Q7Z6P3 723 aaPredicted RBP9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 CABP7Q86V35 215 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 LONP2Q86WA8 852 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 TMEM57Q8N5G2 664 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 PRPF38AQ8NAV1 312 aaKnown RBP9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 COLGALT1Q8NBJ5 622 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 LINC01599Q8WXQ3 324 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 CLUAP1Q96AJ1 413 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 SEMA4CQ9C0C4 833 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 SLC38A10Q9HBR0 1119 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 VPS45Q9NRW7 570 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 RNF146Q9NTX7 359 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 DNMT3LQ9UJW3 386 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 TNNQ9UQP3 1299 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 LZTS1Q9Y250 596 aa9.75□□□□□ -0.85
TNRC6A-212ENST00000567232 MYH7BA7E2Y1 1941 aa9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 ZNF286BP0CG31 522 aa9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 KRT10P13645 584 aa9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 HOXC13P31276 330 aa9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 GABPAQ06546 454 aa9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 HTR4Q13639 388 aa9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 CCDC158Q5M9N0 1113 aa9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 CCNI2Q6ZMN8 369 aaPredicted RBP9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 RTN4RL1Q86UN2 441 aaPredicted RBP9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 LOXL4Q96JB6 756 aa9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 FCRL3Q96P31 734 aaPredicted RBP9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 HSPBP1Q9NZL4 362 aa9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 COL5A1P20908 1838 aaPredicted RBP9.74□□□□□ -0.85
TNRC6A-212ENST00000567232 AHCTF1Q8WYP5 2266 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 MYO5AQ9Y4I1 1855 aaKnown RBP9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 HAS3O00219 553 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 RDXP35241 583 aaKnown RBP9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 RAP1GAPP47736 663 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 ARHGAP4P98171 946 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 TNNI3KQ59H18 835 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 LCE2DQ5TA82 110 aaPredicted RBP9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 TMED8Q6PL24 325 aaPredicted RBP9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 TPRG1Q6ZUI0 275 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 KBTBD6Q86V97 674 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 NPAS4Q8IUM7 802 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 SCUBE3Q8IX30 993 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 ATP6V0A1Q93050 837 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 LIN37Q96GY3 246 aaPredicted RBP9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 NELL2Q99435 816 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 GOPCQ9HD26 462 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 TMEM9BQ9NQ34 198 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 CYP39A1Q9NYL5 469 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 PRR12Q9ULL5 1215 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 FPGT-TNNI3KV9GXZ4 949 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 LRBAP50851 2863 aa9.73□□□□□ -0.85
TNRC6A-212ENST00000567232 ZMYM2Q9UBW7 1377 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms