RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 A0A1B0GUL6 1792 aa27.17■■□□□ 1.94
FANCA-221ENST00000566889 SKIV2L2P42285 1042 aaKnown RBP27.17■■□□□ 1.94
FANCA-221ENST00000566889 EPS15P42566 896 aa27.17■■□□□ 1.94
FANCA-221ENST00000566889 KLRC3Q07444 240 aa27.17■■□□□ 1.94
FANCA-221ENST00000566889 DHX34Q14147 1143 aaKnown RBP27.17■■□□□ 1.94
FANCA-221ENST00000566889 CNGA2Q16280 664 aa27.17■■□□□ 1.94
FANCA-221ENST00000566889 TNFAIP8L3Q5GJ75 292 aa27.17■■□□□ 1.94
FANCA-221ENST00000566889 PNMA1Q8ND90 353 aa27.17■■□□□ 1.94
FANCA-221ENST00000566889 PRCCQ92733 491 aaPredicted RBP27.17■■□□□ 1.94
FANCA-221ENST00000566889 RNF25Q96BH1 459 aaPredicted RBP27.17■■□□□ 1.94
FANCA-221ENST00000566889 ADAM22Q9P0K1 906 aa27.17■■□□□ 1.94
FANCA-221ENST00000566889 FERP16591 822 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 IFI35P80217 286 aaPredicted RBP27.16■■□□□ 1.94
FANCA-221ENST00000566889 TAF11Q15544 211 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 CHADLQ6NUI6 762 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 SPICE1Q8N0Z3 855 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 DDX12PQ92771 950 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 NAF1Q96HR8 494 aaKnown RBP27.16■■□□□ 1.94
FANCA-221ENST00000566889 BSDC1Q9NW68 430 aaPredicted RBP27.16■■□□□ 1.94
FANCA-221ENST00000566889 AMFRQ9UKV5 643 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 PRKCIP41743 596 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 FXR2P51116 673 aaKnown RBP eCLIP27.16■■□□□ 1.94
FANCA-221ENST00000566889 TRAF1Q13077 416 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 LRRC41Q15345 812 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 TRIM31Q9BZY9 425 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 MTFR1LQ9H019 292 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 MAD2L2Q9UI95 211 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 NENFQ9UMX5 172 aa27.16■■□□□ 1.94
FANCA-221ENST00000566889 COL1A1P02452 1464 aaPredicted RBP27.15■■□□□ 1.94
FANCA-221ENST00000566889 NHSL1Q5SYE7 1610 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 ZNF804BA4D1E1 1349 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 SPDYE3A6NKU9 549 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 FGGP02679 453 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 H2AFZP0C0S5 128 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 ABL2P42684 1182 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 SLC30A9Q6PML9 568 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 H2AFVQ71UI9 128 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 VPS36Q86VN1 386 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 TBC1D16Q8TBP0 767 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 OSBPL1AQ9BXW6 950 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 RXFP1Q9HBX9 757 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 RASAL2Q9UJF2 1139 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 ARL2BPQ9Y2Y0 163 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 LAMB1P07942 1786 aa27.15■■□□□ 1.94
FANCA-221ENST00000566889 E7ENQ6 273 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 EVI5O60447 810 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 GJB6O95452 261 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 CMPK2Q5EBM0 449 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 TRIM7Q9C029 511 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 ARPP21Q9UBL0 812 aaPredicted RBP27.14■■□□□ 1.94
FANCA-221ENST00000566889 ATP4AP20648 1035 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 CDC25CP30307 473 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 SLC29A2Q14542 456 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 TMEM266Q2M3C6 531 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 SBK1Q52WX2 424 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 MFN1Q8IWA4 741 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 RAB3IPQ96QF0 476 aaPredicted RBP27.14■■□□□ 1.94
FANCA-221ENST00000566889 LZTS2Q9BRK4 669 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 RAB34Q9BZG1 259 aa27.14■■□□□ 1.94
FANCA-221ENST00000566889 GNA11P29992 359 aa27.13■■□□□ 1.93
FANCA-221ENST00000566889 IGHMBP2P38935 993 aaKnown RBP27.13■■□□□ 1.93
FANCA-221ENST00000566889 SF3A3Q12874 501 aaKnown RBP eCLIP27.13■■□□□ 1.939e-7■■■■■ 44.5
FANCA-221ENST00000566889 KIAA1755Q5JYT7 1200 aa27.13■■□□□ 1.93
FANCA-221ENST00000566889 C6orf50Q9HD87 102 aa27.13■■□□□ 1.93
FANCA-221ENST00000566889 ATP8A2Q9NTI2 1148 aa27.13■■□□□ 1.93
FANCA-221ENST00000566889 PARP2Q9UGN5 583 aa27.13■■□□□ 1.93
FANCA-221ENST00000566889 CD2APQ9Y5K6 639 aa27.13■■□□□ 1.93
FANCA-221ENST00000566889 KIF13BQ9NQT8 1826 aa27.13■■□□□ 1.93
FANCA-221ENST00000566889 IFNAR2P48551 515 aa27.13■■□□□ 1.93
FANCA-221ENST00000566889 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.13■■□□□ 1.932e-6■■■■■ 27.2
FANCA-221ENST00000566889 LRRC42Q9Y546 428 aa27.13■■□□□ 1.93
FANCA-221ENST00000566889 KIF13AQ9H1H9 1805 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 ERVV-1B6SEH8 477 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 HIP1RO75146 1068 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 TXKP42681 527 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 COASYQ13057 564 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 MFSD5Q6N075 450 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 GLIS3Q8NEA6 775 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 CRNKL1Q9BZJ0 848 aaKnown RBP27.12■■□□□ 1.93
FANCA-221ENST00000566889 DCP1AQ9NPI6 582 aaPredicted RBP27.12■■□□□ 1.93
FANCA-221ENST00000566889 TMOD3Q9NYL9 352 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 ANKIB1Q9P2G1 1089 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 STK38LQ9Y2H1 464 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 CCNB1P14635 433 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 RAB27AP51159 221 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 PTPROQ16827 1216 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 FAM26FQ5R3K3 315 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 ZC3H3Q8IXZ2 948 aaKnown RBP27.12■■□□□ 1.93
FANCA-221ENST00000566889 DYDC1Q8WWB3 177 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 MTMR9Q96QG7 549 aa27.12■■□□□ 1.93
FANCA-221ENST00000566889 MTRF1LQ9UGC7 380 aaKnown RBP27.12■■□□□ 1.93
FANCA-221ENST00000566889 A8MUI8 341 aa27.11■■□□□ 1.93
FANCA-221ENST00000566889 CYTH3O43739 400 aa27.11■■□□□ 1.93
FANCA-221ENST00000566889 PLTPP55058 493 aa27.11■■□□□ 1.93
FANCA-221ENST00000566889 PDIA5Q14554 519 aa27.11■■□□□ 1.93
FANCA-221ENST00000566889 THEMIS2Q5TEJ8 643 aa27.11■■□□□ 1.93
FANCA-221ENST00000566889 ZDHHC24Q6UX98 284 aa27.11■■□□□ 1.93
FANCA-221ENST00000566889 CARD9Q9H257 536 aa27.11■■□□□ 1.93
FANCA-221ENST00000566889 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.11■■□□□ 1.93
FANCA-221ENST00000566889 NAPAP54920 295 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms