RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 SNX14Q9Y5W7 946 aa17.02■□□□□ 0.32
RNF40-209ENST00000566703 H3BQ06 376 aaPredicted RBP17.01■□□□□ 0.31
RNF40-209ENST00000566703 GPR182O15218 404 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 EPB41L2O43491 1005 aaKnown RBP17.01■□□□□ 0.31
RNF40-209ENST00000566703 PSAPP07602 524 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 ATP4AP20648 1035 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 SARSP49591 514 aaKnown RBP17.01■□□□□ 0.31
RNF40-209ENST00000566703 CRYBB1P53674 252 aaPredicted RBP17.01■□□□□ 0.31
RNF40-209ENST00000566703 EVCP57679 992 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 NFX1Q12986 1120 aaKnown RBP17.01■□□□□ 0.31
RNF40-209ENST00000566703 NTRK3Q16288 839 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 PPP2R3CQ969Q6 453 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 RNF26Q9BY78 433 aaPredicted RBP17.01■□□□□ 0.31
RNF40-209ENST00000566703 TMX1Q9H3N1 280 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 C1orf112Q9NSG2 853 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 CLDND1Q9NY35 253 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 TCEAL9Q9UHQ7 104 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 CEP131Q9UPN4 1083 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 PCDHA10Q9Y5I2 948 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 MRPL42Q9Y6G3 142 aaKnown RBP17.01■□□□□ 0.31
RNF40-209ENST00000566703 RALGAPA2Q2PPJ7 1873 aa17.01■□□□□ 0.31
RNF40-209ENST00000566703 ZBTB42B2RXF5 422 aa17■□□□□ 0.31
RNF40-209ENST00000566703 MAGEB2O15479 319 aa17■□□□□ 0.31
RNF40-209ENST00000566703 RPS6KA5O75582 802 aa17■□□□□ 0.31
RNF40-209ENST00000566703 REC8O95072 547 aa17■□□□□ 0.31
RNF40-209ENST00000566703 ALADP13716 330 aa17■□□□□ 0.31
RNF40-209ENST00000566703 CPA1P15085 419 aa17■□□□□ 0.31
RNF40-209ENST00000566703 IFNAR1P17181 557 aa17■□□□□ 0.31
RNF40-209ENST00000566703 RPS6KB1P23443 525 aa17■□□□□ 0.31
RNF40-209ENST00000566703 LTBRP36941 435 aa17■□□□□ 0.31
RNF40-209ENST00000566703 HYAL1Q12794 435 aa17■□□□□ 0.31
RNF40-209ENST00000566703 EP400NLQ6ZTU2 488 aa17■□□□□ 0.31
RNF40-209ENST00000566703 SLC24A5Q71RS6 500 aa17■□□□□ 0.31
RNF40-209ENST00000566703 CKAP2LQ8IYA6 745 aa17■□□□□ 0.31
RNF40-209ENST00000566703 CCDC148Q8NFR7 591 aa17■□□□□ 0.31
RNF40-209ENST00000566703 SPPL3Q8TCT6 385 aa17■□□□□ 0.31
RNF40-209ENST00000566703 SH3GLB2Q9NR46 395 aa17■□□□□ 0.31
RNF40-209ENST00000566703 RGS18Q9NS28 235 aa17■□□□□ 0.31
RNF40-209ENST00000566703 RAPGEFL1Q9UHV5 662 aa17■□□□□ 0.31
RNF40-209ENST00000566703 NOC2LQ9Y3T9 749 aaKnown RBP17■□□□□ 0.31
RNF40-209ENST00000566703 PCDHB7Q9Y5E2 793 aa17■□□□□ 0.31
RNF40-209ENST00000566703 SSTR3P32745 418 aaPredicted RBP16.99■□□□□ 0.31
RNF40-209ENST00000566703 USP11P51784 963 aa16.99■□□□□ 0.31
RNF40-209ENST00000566703 FAM189BP81408 668 aa16.99■□□□□ 0.31
RNF40-209ENST00000566703 CAMK1Q14012 370 aa16.99■□□□□ 0.31
RNF40-209ENST00000566703 FAM167AQ96KS9 214 aa16.99■□□□□ 0.31
RNF40-209ENST00000566703 CDHR5Q9HBB8 845 aa16.99■□□□□ 0.31
RNF40-209ENST00000566703 ALG13Q9NP73 1137 aaKnown RBP16.99■□□□□ 0.31
RNF40-209ENST00000566703 ST3GAL5Q9UNP4 418 aa16.99■□□□□ 0.31
RNF40-209ENST00000566703 GINS2Q9Y248 185 aa16.99■□□□□ 0.31
RNF40-209ENST00000566703 C19orf67A6NJJ6 358 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 C9IYK1 514 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 ADAMTS3O15072 1205 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 C22orf31O95567 290 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 ITGB1P05556 798 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 PLA2G5P39877 138 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 ADAM15Q13444 863 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 TMEM266Q2M3C6 531 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 PRR16Q569H4 304 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 KLHL23Q8NBE8 558 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 PHKBQ93100 1093 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 FAM122AQ96E09 287 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 ADAM2Q99965 735 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 C22orf23Q9BZE7 217 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 UPF3BQ9BZI7 483 aaKnown RBP16.98■□□□□ 0.31
RNF40-209ENST00000566703 ELAC1Q9H777 363 aaKnown RBP16.98■□□□□ 0.31
RNF40-209ENST00000566703 C11orf16Q9NQ32 467 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 AAASQ9NRG9 546 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 GABBR1Q9UBS5 961 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 HCN4Q9Y3Q4 1203 aa16.98■□□□□ 0.31
RNF40-209ENST00000566703 BRWD1Q9NSI6 2320 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 DENND3A2RUS2 1198 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 WDR64B1ANS9 1081 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 GPR32O75388 356 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 PDIA3P30101 505 aaKnown RBP16.97■□□□□ 0.31
RNF40-209ENST00000566703 UBE3AQ05086 875 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 ZP2Q05996 745 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 ADHFE1Q8IWW8 467 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 FAM177A1Q8N128 213 aaPredicted RBP16.97■□□□□ 0.31
RNF40-209ENST00000566703 TMEM40Q8WWA1 233 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 LENG9Q96B70 501 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 RIT2Q99578 217 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 NRBP2Q9NSY0 501 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 PCDHB12Q9Y5F1 795 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 MUC3AQ02505 3323 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 NLRC5Q86WI3 1866 aa16.97■□□□□ 0.31
RNF40-209ENST00000566703 MBTPS2O43462 519 aa16.96■□□□□ 0.31
RNF40-209ENST00000566703 MGEA5O60502 916 aa16.96■□□□□ 0.31
RNF40-209ENST00000566703 TMOD1P28289 359 aa16.96■□□□□ 0.31
RNF40-209ENST00000566703 SFNP31947 248 aa16.96■□□□□ 0.31
RNF40-209ENST00000566703 SMAD2Q15796 467 aaKnown RBP16.96■□□□□ 0.31
RNF40-209ENST00000566703 CSPP1Q1MSJ5 1256 aa16.96■□□□□ 0.31
RNF40-209ENST00000566703 PAN2Q504Q3 1202 aaKnown RBP16.96■□□□□ 0.31
RNF40-209ENST00000566703 METTL13Q8N6R0 699 aa16.96■□□□□ 0.31
RNF40-209ENST00000566703 POF1BQ8WVV4 589 aa16.96■□□□□ 0.31
RNF40-209ENST00000566703 POP1Q99575 1024 aaKnown RBP16.96■□□□□ 0.31
RNF40-209ENST00000566703 SLC26A6Q9BXS9 759 aa16.96■□□□□ 0.31
RNF40-209ENST00000566703 TMEM161AQ9NX61 479 aa16.96■□□□□ 0.31
RNF40-209ENST00000566703 SAMM50Q9Y512 469 aa16.96■□□□□ 0.31
RNF40-209ENST00000566703 REV3LO60673 3130 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms