RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 LGR5O75473 907 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 FAM13AO94988 1023 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 TXNP10599 105 aaKnown RBP17.52■□□□□ 0.39
VAC14-208ENST00000566655 PTGS1P23219 599 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 UBASH3AP57075 661 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 NR1I3Q14994 352 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 HSDL1Q3SXM5 330 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 HS1BP3Q53T59 392 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 XKR3Q5GH77 459 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 ZC3H3Q8IXZ2 948 aaKnown RBP17.52■□□□□ 0.39
VAC14-208ENST00000566655 MSL3Q8N5Y2 521 aaKnown RBP17.52■□□□□ 0.39
VAC14-208ENST00000566655 ZNF507Q8TCN5 953 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 NOC3LQ8WTT2 800 aaKnown RBP17.52■□□□□ 0.39
VAC14-208ENST00000566655 TINF2Q9BSI4 451 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 TIPINQ9BVW5 301 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 SRRTQ9BXP5 876 aaKnown RBP17.52■□□□□ 0.39
VAC14-208ENST00000566655 ZNF302Q9NR11 478 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 SEL1LQ9UBV2 794 aa17.52■□□□□ 0.39
VAC14-208ENST00000566655 LRRC63Q05C16 580 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 ARHGAP1Q07960 439 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 TTLL4Q14679 1199 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 XKR9Q5GH70 373 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 TCP11X2Q5H9J9 407 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 LRRC55Q6ZSA7 311 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 OTUD6AQ7L8S5 288 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 TRIM47Q96LD4 638 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 NIFKQ9BYG3 293 aaKnown RBP17.51■□□□□ 0.39
VAC14-208ENST00000566655 ZHX3Q9H4I2 956 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 MLXIPQ9HAP2 919 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 FLRT1Q9NZU1 646 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 NRBP1Q9UHY1 535 aa17.51■□□□□ 0.39
VAC14-208ENST00000566655 PLXNB2O15031 1838 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 USO1O60763 962 aaKnown RBP17.5■□□□□ 0.39
VAC14-208ENST00000566655 AOC2O75106 756 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 PPP1R37O75864 691 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 SERPINC1P01008 464 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 OATP04181 439 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 NMT1P30419 496 aaKnown RBP17.5■□□□□ 0.39
VAC14-208ENST00000566655 TCF7P36402 384 aaPredicted RBP17.5■□□□□ 0.39
VAC14-208ENST00000566655 KRT31Q15323 416 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 TARBP2Q15633 366 aaKnown RBP17.5■□□□□ 0.39
VAC14-208ENST00000566655 CCDC144BQ3MJ40 725 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 ZNF720Q7Z2F6 126 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 MYCT1Q8N699 235 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 CSGALNACT2Q8N6G5 542 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 SPC24Q8NBT2 197 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 ZNF784Q8NCA9 323 aaPredicted RBP17.5■□□□□ 0.39
VAC14-208ENST00000566655 EMID1Q96A84 441 aaPredicted RBP17.5■□□□□ 0.39
VAC14-208ENST00000566655 XPNPEP1Q9NQW7 623 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 CYP26B1Q9NR63 512 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 CREBZFQ9NS37 354 aa17.5■□□□□ 0.39
VAC14-208ENST00000566655 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.49■□□□□ 0.39
VAC14-208ENST00000566655 KCNJ18B7U540 433 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 NKRFO15226 690 aaKnown RBP eCLIP17.49■□□□□ 0.39
VAC14-208ENST00000566655 EIF3DO15371 548 aaKnown RBP eCLIP17.49■□□□□ 0.39
VAC14-208ENST00000566655 CBFA2T2O43439 604 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 PRPF6O94906 941 aaKnown RBP17.49■□□□□ 0.39
VAC14-208ENST00000566655 MAPTP10636 758 aaKnown RBP17.49■□□□□ 0.39
VAC14-208ENST00000566655 CDK11BP21127 795 aaKnown RBP17.49■□□□□ 0.39
VAC14-208ENST00000566655 PBX1P40424 430 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 ADCYAP1R1P41586 468 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 STAT5BP51692 787 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 SPAG1Q07617 926 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 NOGQ13253 232 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 ACVR2BQ13705 512 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 KCNJ12Q14500 433 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 TPD52L1Q16890 204 aaPredicted RBP17.49■□□□□ 0.39
VAC14-208ENST00000566655 NELFCDQ8IXH7 590 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 DHX37Q8IY37 1157 aaKnown RBP17.49■□□□□ 0.39
VAC14-208ENST00000566655 CEP170P1Q96L14 293 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 MRPL44Q9H9J2 332 aaKnown RBP17.49■□□□□ 0.39
VAC14-208ENST00000566655 GPRC5CQ9NQ84 441 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 TRAF3IP3Q9Y228 551 aa17.49■□□□□ 0.39
VAC14-208ENST00000566655 EMSYQ7Z589 1322 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 KIF20AO95235 890 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 PLS3P13797 630 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 COPB1P53618 953 aaKnown RBP17.48■□□□□ 0.39
VAC14-208ENST00000566655 KCNA1Q09470 495 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 IRF5Q13568 498 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 LAMC2Q13753 1193 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 KNOP1Q1ED39 458 aaKnown RBP17.48■□□□□ 0.39
VAC14-208ENST00000566655 DEFB115Q30KQ5 88 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 GJC2Q5T442 439 aaPredicted RBP17.48■□□□□ 0.39
VAC14-208ENST00000566655 MAEAQ7L5Y9 396 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 PLPPR4Q7Z2D5 763 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 VSTM4Q8IW00 320 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 CAPNS2Q96L46 248 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 SPATA33Q96N06 139 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 ABHD16BQ9H3Z7 469 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 RTN4Q9NQC3 1192 aaKnown RBP17.48■□□□□ 0.39
VAC14-208ENST00000566655 SLC5A4Q9NY91 659 aa17.48■□□□□ 0.39
VAC14-208ENST00000566655 SEPT9Q9UHD8 586 aaPredicted RBP17.48■□□□□ 0.39
VAC14-208ENST00000566655 KIAA1217Q5T5P2 1943 aa17.47■□□□□ 0.39
VAC14-208ENST00000566655 ZMYM2Q9UBW7 1377 aa17.47■□□□□ 0.39
VAC14-208ENST00000566655 UBE4BO95155 1302 aa17.47■□□□□ 0.39
VAC14-208ENST00000566655 TEX33O43247 280 aa17.47■□□□□ 0.39
VAC14-208ENST00000566655 TGFB1I1O43294 461 aa17.47■□□□□ 0.39
VAC14-208ENST00000566655 DGAT1O75907 488 aa17.47■□□□□ 0.39
VAC14-208ENST00000566655 SMPD1P17405 629 aa17.47■□□□□ 0.39
VAC14-208ENST00000566655 EEF1GP26641 437 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms