RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 ZNF484Q5JVG2 852 aa18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 HAUS3Q68CZ6 603 aa18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 CCDC43Q96MW1 224 aaKnown RBP18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 ARID2Q68CP9 1835 aa18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 BRD1O95696 1058 aa18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 HOXC8P31273 242 aa18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 CYP2C18P33260 490 aa18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 CCT6AP40227 531 aaKnown RBP18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 CCL23P55773 120 aa18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 STK38Q15208 465 aa18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 PLA2G4FQ68DD2 849 aa18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 RETREG2Q8NC44 543 aa18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 SNX29Q8TEQ0 813 aa18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 DHX38Q92620 1227 aaKnown RBP18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 SH2D3AQ9BRG2 576 aa18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 NOC4LQ9BVI4 516 aaKnown RBP18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 FAM49AQ9H0Q0 323 aaPredicted RBP18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 ZSWIM4Q9H7M6 989 aa18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 WRAP73Q9P2S5 460 aaPredicted RBP18.3■□□□□ 0.52
SCAMP2-208ENST00000566557 PP2D1A8MPX8 630 aa18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 TIMP1P01033 207 aa18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 MARCKSP29966 332 aaPredicted RBP18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 THPOP40225 353 aa18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 ZRSR1Q15695 479 aaKnown RBP18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 IL17AQ16552 155 aa18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 ARL6IP4Q66PJ3 421 aaKnown RBP18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 RUFY4Q6ZNE9 571 aa18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 SERINC5Q86VE9 423 aa18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 CAGE1Q8TC20 777 aa18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 WNT8BQ93098 351 aa18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 CTAGE1Q96RT6 745 aa18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 TFIP11Q9UBB9 837 aaKnown RBP18.29■□□□□ 0.52
SCAMP2-208ENST00000566557 MED24O75448 989 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 SLITRK3O94933 977 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 CTSHP09668 335 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 NCLP19338 710 aaKnown RBP18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 ITGB8P26012 769 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 KLRC1P26715 233 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 YWHABP31946 246 aaKnown RBP18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 MARCH8Q5T0T0 291 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 KRT79Q5XKE5 535 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 POTEGQ6S5H5 508 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 MTHFD1LQ6UB35 978 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 C4orf19Q8IY42 314 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 IGSF22Q8N9C0 903 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 SCLYQ96I15 445 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 TUFT1Q9NNX1 390 aa18.28■□□□□ 0.52
SCAMP2-208ENST00000566557 MBLAC1A4D2B0 266 aaPredicted RBP18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 CDC25AP30304 524 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 ADAM17P78536 824 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 TBC1D8BQ0IIM8 1120 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 PDIA5Q14554 519 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 PTPAQ15257 358 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 XKR9Q5GH70 373 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 TAF2Q6P1X5 1199 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 OTUD6AQ7L8S5 288 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 RSPH3Q86UC2 560 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 CATSPER3Q86XQ3 398 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 TMEM199Q8N511 208 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 METTL13Q8N6R0 699 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 RASSF8Q8NHQ8 419 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 DNAJB3Q8WWF6 145 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 CEP170P1Q96L14 293 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 HSD17B14Q9BPX1 270 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 POLR3CQ9BUI4 534 aaPredicted RBP18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 WNT8AQ9H1J5 351 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 TSHZ2Q9NRE2 1034 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 BMP2KQ9NSY1 1161 aaPredicted RBP18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 ZDHHC9Q9Y397 364 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 STK24Q9Y6E0 443 aa18.27■□□□□ 0.52
SCAMP2-208ENST00000566557 A0A087WWV3 80 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 ZBTB42B2RXF5 422 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 PITPNM1O00562 1244 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 C22orf31O95567 290 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 CKBP12277 381 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 RPA1P27694 616 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 NPEPPSP55786 919 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 NUCB2P80303 420 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 DNM1Q05193 864 aaKnown RBP18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 GRIN1Q05586 938 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 FPGSQ05932 587 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 GRIN2CQ14957 1233 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 MFSD5Q6N075 450 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 ANO5Q75V66 913 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 LRRC8DQ7L1W4 858 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 LRRC71Q8N4P6 559 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 USP38Q8NB14 1042 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 PIGOQ8TEQ8 1089 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 CDK5RAP3Q96JB5 506 aa18.26■□□□□ 0.51
SCAMP2-208ENST00000566557 KDM3AQ9Y4C1 1321 aa18.25■□□□□ 0.51
SCAMP2-208ENST00000566557 M0QZ92 97 aa18.25■□□□□ 0.51
SCAMP2-208ENST00000566557 ZBTB39O15060 712 aa18.25■□□□□ 0.51
SCAMP2-208ENST00000566557 STBD1O95210 358 aa18.25■□□□□ 0.51
SCAMP2-208ENST00000566557 SPATA31C1P0DKV0 1188 aa18.25■□□□□ 0.51
SCAMP2-208ENST00000566557 CSF2RAP15509 400 aa18.25■□□□□ 0.51
SCAMP2-208ENST00000566557 SELPP16109 830 aa18.25■□□□□ 0.51
SCAMP2-208ENST00000566557 NASPP49321 788 aaPredicted RBP18.25■□□□□ 0.51
SCAMP2-208ENST00000566557 CLCN3P51790 818 aa18.25■□□□□ 0.51
SCAMP2-208ENST00000566557 POLGP54098 1239 aaPredicted RBP18.25■□□□□ 0.51
SCAMP2-208ENST00000566557 SLC39A14Q15043 492 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms