RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 FAAP100Q0VG06 881 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 KARSQ15046 597 aaKnown RBP9.14□□□□□ -0.95
CDH13-208ENST00000566333 TRIM71Q2Q1W2 868 aaKnown RBP9.14□□□□□ -0.95
CDH13-208ENST00000566333 XKR3Q5GH77 459 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 FAM47CQ5HY64 1035 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 RUFY4Q6ZNE9 571 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 CABP7Q86V35 215 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 TPH2Q8IWU9 490 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 LINC01465Q8N7H1 131 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 C7orf31Q8N865 590 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 ERMNQ8TAM6 284 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 SPATA32Q96LK8 384 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 TOX2Q96NM4 488 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 SH2D3AQ9BRG2 576 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 NIFKQ9BYG3 293 aaKnown RBP9.14□□□□□ -0.95
CDH13-208ENST00000566333 CCSER1Q9C0I3 900 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 SCAND2PQ9GZW5 306 aaPredicted RBP9.14□□□□□ -0.95
CDH13-208ENST00000566333 PDLIM7Q9NR12 457 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 SEPT9Q9UHD8 586 aaPredicted RBP9.14□□□□□ -0.95
CDH13-208ENST00000566333 TUBE1Q9UJT0 475 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 TBX21Q9UL17 535 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 PCDHA7Q9UN72 937 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 MROH7Q68CQ1 1323 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 A0A087WWV3 80 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 C17orf102A2RUQ5 167 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 TREHO43280 583 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 SLC26A4O43511 780 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 PLCG1P19174 1290 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 ME1P48163 572 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 RARRES1P49788 294 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 NPEPPSP55786 919 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 RBL2Q08999 1139 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 MTERF2Q49AM1 385 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 NAALADL2Q58DX5 795 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 RESP18Q5W5W9 173 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 KRT79Q5XKE5 535 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 CLEC17AQ6ZS10 378 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 TRMT1LQ7Z2T5 733 aaKnown RBP9.13□□□□□ -0.95
CDH13-208ENST00000566333 SERINC5Q86VE9 423 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 CKAP2LQ8IYA6 745 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 TMEM87AQ8NBN3 555 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 PIGOQ8TEQ8 1089 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 VTI1AQ96AJ9 217 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 SEZ6LQ9BYH1 1024 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 CYP26B1Q9NR63 512 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 BLOC1S4Q9NUP1 217 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 DDX19AQ9NUU7 478 aaKnown RBP9.13□□□□□ -0.95
CDH13-208ENST00000566333 ATP11BQ9Y2G3 1177 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 GBF1Q92538 1859 aa9.13□□□□□ -0.95
CDH13-208ENST00000566333 UMODL1Q5DID0 1318 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 IGKV6-21A0A0C4DH24 114 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 FAM237AA0A1B0GTK4 181 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 RRN3P2A6NIE6 340 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 E9PMD0 336 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 DKC1O60832 514 aaKnown RBP eCLIP9.12□□□□□ -0.95
CDH13-208ENST00000566333 CAPN15O75808 1086 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 CLTBP09497 229 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 CYP2C9P11712 490 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 IGBP1P78318 339 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
CDH13-208ENST00000566333 DRP2Q13474 957 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 E2F4Q16254 413 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 PTGISQ16647 500 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 ZNF484Q5JVG2 852 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 TRAF7Q6Q0C0 670 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 MTHFD1LQ6UB35 978 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 SH3RF1Q7Z6J0 888 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 C7orf61Q8IZ16 206 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 NOC4LQ9BVI4 516 aaKnown RBP9.12□□□□□ -0.95
CDH13-208ENST00000566333 GOLPH3LQ9H4A5 285 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 DHX33Q9H6R0 707 aaKnown RBP9.12□□□□□ -0.95
CDH13-208ENST00000566333 XPNPEP1Q9NQW7 623 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 ANKEF1Q9NU02 776 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 DBR1Q9UK59 544 aaKnown RBP9.12□□□□□ -0.95
CDH13-208ENST00000566333 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 HPSEQ9Y251 543 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 STK24Q9Y6E0 443 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 TRIOBPQ9H2D6 2365 aa9.12□□□□□ -0.95
CDH13-208ENST00000566333 TRIM43BA6NCK2 446 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 MAFO75444 373 aaPredicted RBP9.11□□□□□ -0.95
CDH13-208ENST00000566333 EYA4O95677 639 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 ITGB8P26012 769 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 KLRC1P26715 233 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 UBA7P41226 1012 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 CLCN3P51790 818 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 SLC12A3P55017 1021 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 PTK7Q13308 1070 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 EMC2Q15006 297 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 ZRSR1Q15695 479 aaKnown RBP9.11□□□□□ -0.95
CDH13-208ENST00000566333 ADALQ6DHV7 355 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 LRRC71Q8N4P6 559 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 TRIM43Q96BQ3 446 aaPredicted RBP9.11□□□□□ -0.95
CDH13-208ENST00000566333 CEP170P1Q96L14 293 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 NACC1Q96RE7 527 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 PLIN2Q99541 437 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 HTATIP2Q9BUP3 242 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 RUSC1Q9BVN2 902 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 NT5C3AQ9H0P0 336 aa9.11□□□□□ -0.95
CDH13-208ENST00000566333 WNT8AQ9H1J5 351 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms