RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 MAPK8IP1Q9UQF2 711 aa9.81□□□□□ -0.84
LSM3P5-201ENST00000566307 PPME1Q9Y570 386 aa9.81□□□□□ -0.84
LSM3P5-201ENST00000566307 WDR81Q562E7 1941 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 IGKV6D-21A0A0A0MT36 114 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 SOWAHBA6NEL2 793 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 TEX33O43247 280 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 STX10O60499 249 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 FAM13AO94988 1023 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 PSAPP07602 524 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 ABCD1P33897 745 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 RARRES1P49788 294 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 SNRPFP62306 86 aaKnown RBP9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 ERVK-9P63128 1117 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 ERVK-24P63145 666 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 PPP2R3AQ06190 1150 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 MAPK7Q13164 816 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 NEDD9Q14511 834 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 NOLC1Q14978 699 aaKnown RBP eCLIP9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 MAN2A1Q16706 1144 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 KNOP1Q1ED39 458 aaKnown RBP9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 MAP1SQ66K74 1059 aaPredicted RBP9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 ABHD15Q6UXT9 468 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 SFR1Q86XK3 245 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 CNOT6LQ96LI5 555 aaKnown RBP9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 ERGIC2Q96RQ1 377 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 FIZ1Q96SL8 496 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 TUBGCP2Q9BSJ2 902 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 NUP58Q9BVL2 599 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 C17orf75Q9HAS0 396 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 JPH1Q9HDC5 661 aaPredicted RBP9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 TXNRD2Q9NNW7 524 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 TYW1Q9NV66 732 aaKnown RBP9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 CGNQ9P2M7 1197 aaKnown RBP9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 SLC9A2Q9UBY0 812 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 TRPM7Q96QT4 1865 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 ASTN1O14525 1302 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 IGSF9BQ9UPX0 1349 aa9.8□□□□□ -0.84
LSM3P5-201ENST00000566307 NPHP3-ACAD11A0A0J9YXS1 232 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 SLC16A3O15427 465 aaKnown RBP9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 ARHGAP6O43182 974 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 CCP110O43303 1012 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 STRNO43815 780 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 OFD1O75665 1012 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 STBD1O95210 358 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 TUBB4AP04350 444 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 SKILP12757 684 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 YWHABP31946 246 aaKnown RBP9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 RTP1P59025 263 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 MCCD1P59942 119 aaPredicted RBP9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 LRMPQ12912 555 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 IRF5Q13568 498 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 KCTD2Q14681 263 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 MIIPQ5JXC2 388 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 SPRYD7Q5W111 196 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 MIS18BP1Q6P0N0 1132 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 PADI6Q6TGC4 694 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 OTUD6AQ7L8S5 288 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 ZNF720Q7Z2F6 126 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 NCAPG2Q86XI2 1143 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 CNGA4Q8IV77 575 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 TC2NQ8N9U0 490 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 BANK1Q8NDB2 785 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 GOLGA5Q8TBA6 731 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 PIGOQ8TEQ8 1089 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 HPS3Q969F9 1004 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 HVCN1Q96D96 273 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 FGD4Q96M96 766 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 DRC1Q96MC2 740 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 ZNF830Q96NB3 372 aaPredicted RBP9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 PURBQ96QR8 312 aaKnown RBP9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 UIMC1Q96RL1 719 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 MKNK1Q9BUB5 465 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 EDEM3Q9BZQ6 932 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 TAB2Q9NYJ8 693 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 LARSQ9P2J5 1176 aaKnown RBP9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 KCNG1Q9UIX4 513 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 FAM184BQ9ULE4 1060 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 PYCARDQ9ULZ3 195 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 ZNF236Q9UL36 1845 aa9.79□□□□□ -0.84
LSM3P5-201ENST00000566307 CCL15-CCL14A0A0B4J2E2 113 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 A0A1W2PQJ5 194 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 ASB14A6NK59 587 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 BTBD19C9JJ37 291 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 AKR1B15C9JRZ8 316 aaPredicted RBP9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 DDX39AO00148 427 aaKnown RBP9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 TRAF5O00463 557 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 CETN3O15182 167 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 CALUO43852 315 aaPredicted RBP9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 ITGBL1O95965 494 aaPredicted RBP9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 TPM1P09493 284 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 SUPT20HL2P0C7V6 817 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 RPL13P26373 211 aaKnown RBP9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 ACTR2P61160 394 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 CNTN2Q02246 1040 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 CCL15Q16663 113 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 Q3C1V9 767 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 XKR3Q5GH77 459 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 IER5LQ5T953 404 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 FRMD5Q7Z6J6 570 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms