RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 RIPK3Q9Y572 518 aa18.62■□□□□ 0.57
RAB40C-210ENST00000566290 IPO5O00410 1097 aaKnown RBP18.61■□□□□ 0.57
RAB40C-210ENST00000566290 CCP110O43303 1012 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 GAS7O60861 476 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 COBLO75128 1261 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 HMGCRP04035 888 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 TUBB4AP04350 444 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 XRCC5P13010 732 aaKnown RBP18.61■□□□□ 0.57
RAB40C-210ENST00000566290 STAT3P40763 770 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 COPB1P53618 953 aaKnown RBP18.61■□□□□ 0.57
RAB40C-210ENST00000566290 RPS6P62753 249 aaKnown RBP18.61■□□□□ 0.57
RAB40C-210ENST00000566290 ZCWPW2Q504Y3 356 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 RNF207Q6ZRF8 634 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 GPBP1Q86WP2 473 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 RIOX2Q8IUF8 465 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 MAFAQ8NHW3 353 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-210ENST00000566290 CYP2W1Q8TAV3 490 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 GPRASP2Q96D09 838 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 TRERF1Q96PN7 1200 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 PDCD2LQ9BRP1 358 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 ZNF577Q9BSK1 485 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 HMX1Q9NP08 348 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-210ENST00000566290 RNF146Q9NTX7 359 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 OGDHLQ9ULD0 1010 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 PCDHA2Q9Y5H9 948 aa18.61■□□□□ 0.57
RAB40C-210ENST00000566290 LGALS16A8MUM7 142 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 E9PMD0 336 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 GAP43P17677 238 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 ITGB5P18084 799 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 ADORA2AP29274 412 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 PGM5Q15124 567 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 BMT2Q1RMZ1 405 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 MUM1L1Q5H9M0 696 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 CSGALNACT2Q8N6G5 542 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 CHST13Q8NET6 341 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 PANX2Q96RD6 677 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 APBA2Q99767 749 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 NAA15Q9BXJ9 866 aaKnown RBP18.6■□□□□ 0.57
RAB40C-210ENST00000566290 PXMP2Q9NR77 195 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 OLFML3Q9NRN5 406 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 PANK4Q9NVE7 773 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 SEL1LQ9UBV2 794 aa18.6■□□□□ 0.57
RAB40C-210ENST00000566290 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.6■□□□□ 0.575e-6■■■■□ 23
RAB40C-210ENST00000566290 UBE4BO95155 1302 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 STX10O60499 249 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 FCER1AP12319 257 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 COPB2P35606 906 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 PMS1P54277 932 aaKnown RBP18.59■□□□□ 0.57
RAB40C-210ENST00000566290 CACNB2Q08289 660 aaPredicted RBP18.59■□□□□ 0.57
RAB40C-210ENST00000566290 EDRF1Q3B7T1 1238 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 MAP3K21Q5TCX8 1036 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 ZNF697Q5TEC3 545 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 POTEGQ6S5H5 508 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 MYOCDQ8IZQ8 938 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 CPXCR1Q8N123 301 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 CEP63Q96MT8 703 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 NACC1Q96RE7 527 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 SENP7Q9BQF6 1050 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 MROH8Q9H579 483 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 ACAD9Q9H845 621 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 AGO4Q9HCK5 861 aaKnown RBP18.59■□□□□ 0.57
RAB40C-210ENST00000566290 KCNH7Q9NS40 1196 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 MAGEC2Q9UBF1 373 aaPredicted RBP18.59■□□□□ 0.57
RAB40C-210ENST00000566290 FBXO40Q9UH90 709 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 ODF2LQ9ULJ1 636 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 IVNS1ABPQ9Y6Y0 642 aa18.59■□□□□ 0.57
RAB40C-210ENST00000566290 KIF2AO00139 706 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-210ENST00000566290 EML1O00423 815 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 DHX15O43143 795 aaKnown RBP18.58■□□□□ 0.56
RAB40C-210ENST00000566290 ARHGAP6O43182 974 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 SLITRK3O94933 977 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 IGHA2P01877 340 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 TPM2P07951 284 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 HOXC6P09630 235 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 PRKAR2AP13861 404 aaKnown RBP18.58■□□□□ 0.56
RAB40C-210ENST00000566290 SFNP31947 248 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 DNM2P50570 870 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 MARSP56192 900 aaKnown RBP18.58■□□□□ 0.56
RAB40C-210ENST00000566290 MRPS9P82933 396 aaKnown RBP18.58■□□□□ 0.56
RAB40C-210ENST00000566290 ARID5BQ14865 1188 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 LRRC26Q2I0M4 334 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 ARSHQ5FYA8 562 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 FIGNQ5HY92 759 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 SNRNP48Q6IEG0 339 aaKnown RBP18.58■□□□□ 0.56
RAB40C-210ENST00000566290 CNGA4Q8IV77 575 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 RETREG2Q8NC44 543 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 ZNF507Q8TCN5 953 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 GJA10Q969M2 543 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 CDHR1Q96JP9 859 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 INPP4AQ96PE3 977 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-210ENST00000566290 TSG101Q99816 390 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 MUC3AQ02505 3323 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 ZNF236Q9UL36 1845 aa18.58■□□□□ 0.56
RAB40C-210ENST00000566290 TRIM49BA6NDI0 452 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 N4BP3O15049 544 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 STRNO43815 780 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 SLC25A27O95847 323 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 PGK2P07205 417 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 ARP10275 920 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 IDEP14735 1019 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms