RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 MGAT3Q09327 533 aa15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 ORC2Q13416 577 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 NBR1Q14596 966 aa15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 RAB30Q15771 203 aa15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 UGCGQ16739 394 aa15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 Q7L0L9 218 aa15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 DBF4BQ8NFT6 615 aa15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 SEPT8Q92599 483 aa15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 PBX4Q9BYU1 374 aa15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 MSRAQ9UJ68 235 aa15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 PCDHA12Q9UN75 941 aa15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 CDY2AQ9Y6F7 541 aa15.54■□□□□ 0.08
HERPUD1-210ENST00000565966 TMEM265A0A087WTH1 108 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 VPS37CA5D8V6 355 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 M0QZ92 97 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 DKC1O60832 514 aaKnown RBP eCLIP15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 P4HBP07237 508 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 SYT1P21579 422 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 PSMC5P62195 406 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 MRPS6P82932 125 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 EPHA7Q15375 998 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 TCTN1Q2MV58 587 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 XKR3Q5GH77 459 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 APBB2Q92870 758 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 TIFAQ96CG3 184 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 OSBPL7Q9BZF2 842 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 SEMA6BQ9H3T3 888 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 MTMR10Q9NXD2 777 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 PCDHB6Q9Y5E3 794 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 SQORQ9Y6N5 450 aa15.53■□□□□ 0.08
HERPUD1-210ENST00000565966 C22orf31O95567 290 aa15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 PBX2P40425 430 aa15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 TXKP42681 527 aa15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 QARSP47897 775 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 WDR5P61964 334 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 TMEM62Q0P6H9 643 aa15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 KIAA0319LQ8IZA0 1049 aa15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 C4orf32Q8N8J7 132 aa15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 BANK1Q8NDB2 785 aa15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 NIFKQ9BYG3 293 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 IFIH1Q9BYX4 1025 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 CELF4Q9BZC1 486 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 TTC12Q9H892 705 aaPredicted RBP15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 PCDHA11Q9Y5I1 949 aa15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 TRPV2Q9Y5S1 764 aa15.52■□□□□ 0.08
HERPUD1-210ENST00000565966 KDM3AQ9Y4C1 1321 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 STBD1O95210 358 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 OR52Z1P0C646 297 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 GHRP10912 638 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 TMOD1P28289 359 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 RABGGTBP53611 331 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 TARBP2Q15633 366 aaKnown RBP15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 RILPL1Q5EBL4 403 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 FBXO47Q5MNV8 452 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 NCAPH2Q6IBW4 605 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 EFCAB12Q6NXP0 572 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 METTL13Q8N6R0 699 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 USP38Q8NB14 1042 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 TTYH1Q9H313 450 aaPredicted RBP15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 SEPT9Q9UHD8 586 aaPredicted RBP15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 TTC3P53804 2025 aa15.51■□□□□ 0.07
HERPUD1-210ENST00000565966 ARID2Q68CP9 1835 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 DDX11L8A8MPP1 907 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 HSP90AA1P07900 732 aaKnown RBP15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 DEFB103AP81534 67 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 TBC1D8BQ0IIM8 1120 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 LPIN1Q14693 890 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 TSHZ1Q6ZSZ6 1077 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 BRAPQ7Z569 592 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 FERMT3Q86UX7 667 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 HERC6Q8IVU3 1022 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 FAM161BQ96MY7 647 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 ZNF576Q9H609 170 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 MTMR6Q9Y217 621 aa15.5■□□□□ 0.07
HERPUD1-210ENST00000565966 STX6O43752 255 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 AMHP03971 560 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 RESTQ13127 1097 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 PTGDRQ13258 359 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 MKRN4PQ13434 485 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 MTERF2Q49AM1 385 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 ANO5Q75V66 913 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 C4orf19Q8IY42 314 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 ZNF710Q8N1W2 664 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 LINC01465Q8N7H1 131 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 SPRYD3Q8NCJ5 442 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 DYDC2Q96IM9 177 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 LXNQ9BS40 222 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 NKX2-4Q9H2Z4 354 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 ZSWIM4Q9H7M6 989 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 SUGCTQ9HAC7 445 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 SLC28A3Q9HAS3 691 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 RGL1Q9NZL6 768 aa15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 YBX2Q9Y2T7 364 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-210ENST00000565966 POTEMA6NI47 508 aa15.48■□□□□ 0.07
HERPUD1-210ENST00000565966 RBAK-RBAKDNI3L0D1 243 aa15.48■□□□□ 0.07
HERPUD1-210ENST00000565966 SLITRK3O94933 977 aa15.48■□□□□ 0.07
HERPUD1-210ENST00000565966 CLCN3P51790 818 aa15.48■□□□□ 0.07
HERPUD1-210ENST00000565966 CTTNQ14247 550 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms