RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 FAM47E-STBD1D6RA91 191 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 DDX46Q7L014 1031 aaKnown RBP5.53□□□□□ -1.52
LINC00561-201ENST00000565815 CHST14Q8NCH0 376 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 WDR66Q8TBY9 1149 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 ZFYVE21Q9BQ24 234 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 PDLIM7Q9NR12 457 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 EDARQ9UNE0 448 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 SPATA31A5Q5VU36 1347 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 SPATA31A7Q8IWB4 1347 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 FAM90A27PA6NNH2 459 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 TGM5O43548 720 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 NRDCO43847 1150 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 FKBP9O95302 570 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 HPXP02790 462 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 DBHP09172 617 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 GP2P55259 537 aaKnown RBP5.52□□□□□ -1.53
LINC00561-201ENST00000565815 CYP4F8P98187 520 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 DUSP4Q13115 394 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 FKBP9P1Q75LS8 142 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 ANKS4BQ8N8V4 417 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 MYLIPQ8WY64 445 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 ASIC4Q96FT7 647 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 OXSMQ9NWU1 459 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 LMCD1Q9NZU5 365 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 WASF3Q9UPY6 502 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 WNT9AO14904 365 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 ZBTB48P10074 688 aaPredicted RBP5.52□□□□□ -1.53
LINC00561-201ENST00000565815 HMGB2P26583 209 aaKnown RBP5.52□□□□□ -1.53
LINC00561-201ENST00000565815 SOX5P35711 763 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 KIR2DL1P43626 348 aaPredicted RBP5.52□□□□□ -1.53
LINC00561-201ENST00000565815 KIR2DL2P43627 348 aaPredicted RBP5.52□□□□□ -1.53
LINC00561-201ENST00000565815 GUCY2FP51841 1108 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 NCKAP1LP55160 1127 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 IRF9Q00978 393 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 LRRC41Q15345 812 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 PLEKHG6Q3KR16 790 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 IQCEQ6IPM2 695 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 PALD1Q9ULE6 856 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 X6R8D5 127 aa5.52□□□□□ -1.53
LINC00561-201ENST00000565815 MAP3K5Q99683 1374 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 ANKRD30BQ9BXX2 1392 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 IBSPP21815 317 aaPredicted RBP5.51□□□□□ -1.53
LINC00561-201ENST00000565815 ESRP1Q6NXG1 681 aaKnown RBP5.51□□□□□ -1.53
LINC00561-201ENST00000565815 HDGFL2Q7Z4V5 671 aaPredicted RBP5.51□□□□□ -1.53
LINC00561-201ENST00000565815 MILR1Q7Z6M3 343 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 DDX53Q86TM3 631 aaKnown RBP5.51□□□□□ -1.53
LINC00561-201ENST00000565815 FERMT3Q86UX7 667 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 FAM26EQ8N5C1 309 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 C2orf69Q8N8R5 385 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 CLRN3Q8NCR9 226 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 ELF4Q99607 663 aaPredicted RBP5.51□□□□□ -1.53
LINC00561-201ENST00000565815 ASPSCR1Q9BZE9 553 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.51□□□□□ -1.53
LINC00561-201ENST00000565815 TNFRSF12AQ9NP84 129 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 NRXN1Q9ULB1 1477 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 TRBV23OR9-2A0A075B6M9 112 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 PRKD3O94806 890 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 PDGFRBP09619 1106 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 IARSP41252 1262 aaKnown RBP5.51□□□□□ -1.53
LINC00561-201ENST00000565815 ABCB5Q2M3G0 1257 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 STEAP3Q658P3 488 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 RPTNQ6XPR3 784 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 STK32CQ86UX6 486 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.51□□□□□ -1.53
LINC00561-201ENST00000565815 ACSL6Q9UKU0 697 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 ABCA3Q99758 1704 aa5.51□□□□□ -1.53
LINC00561-201ENST00000565815 GPR39O43194 453 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 GDNFP39905 211 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 CNTD1Q8N815 330 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 TSR2Q969E8 191 aaKnown RBP5.5□□□□□ -1.53
LINC00561-201ENST00000565815 SYTL4Q96C24 671 aaPredicted RBP5.5□□□□□ -1.53
LINC00561-201ENST00000565815 DSEQ9UL01 958 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 GPRASP1Q5JY77 1395 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 NUP188Q5SRE5 1749 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 A0A1W2PQJ5 194 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 ACOT7O00154 380 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 PLSCR1O15162 318 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 DGKIO75912 1065 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 STAT5AP42229 794 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 ITKQ08881 620 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 TMEM132BQ14DG7 1078 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 EZH2Q15910 746 aaKnown RBP5.5□□□□□ -1.53
LINC00561-201ENST00000565815 LIN37Q96GY3 246 aaPredicted RBP5.5□□□□□ -1.53
LINC00561-201ENST00000565815 TTC1Q99614 292 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 IRF2BPLQ9H1B7 796 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 HOMER2Q9NSB8 354 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 CHD4Q14839 1912 aa5.5□□□□□ -1.53
LINC00561-201ENST00000565815 FITM1A5D6W6 292 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 PARNO95453 639 aaKnown RBP5.49□□□□□ -1.53
LINC00561-201ENST00000565815 BPIP17213 487 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 MC4RP32245 332 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 LRP8Q14114 963 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 CRY1Q16526 586 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 HABP4Q5JVS0 413 aaKnown RBP5.49□□□□□ -1.53
LINC00561-201ENST00000565815 UBE2R2Q712K3 238 aaPredicted RBP5.49□□□□□ -1.53
LINC00561-201ENST00000565815 C16orf59Q7L2K0 433 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 SLC51AQ86UW1 340 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 TGFBRAP1Q8WUH2 860 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 RTF1Q92541 710 aaKnown RBP5.49□□□□□ -1.53
LINC00561-201ENST00000565815 USP7Q93009 1102 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms