RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 C5orf67F2Z3F1 127 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 M0QZ92 97 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 MSH4O15457 936 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 RPLP2P05387 115 aaKnown RBP26.92■■□□□ 1.9
RAB40C-209ENST00000565511 BMPR1AP36894 532 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 NPY5RQ15761 445 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 ZNF484Q5JVG2 852 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 BANK1Q8NDB2 785 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.92■■□□□ 1.9
RAB40C-209ENST00000565511 CD320Q9NPF0 282 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 TBC1D22BQ9NU19 505 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 GABBR1Q9UBS5 961 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 RAPGEFL1Q9UHV5 662 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 GINS2Q9Y248 185 aa26.92■■□□□ 1.9
RAB40C-209ENST00000565511 ZNF862O60290 1169 aa26.91■■□□□ 1.9
RAB40C-209ENST00000565511 BTG3Q14201 252 aaPredicted RBP26.91■■□□□ 1.9
RAB40C-209ENST00000565511 UGCGQ16739 394 aa26.91■■□□□ 1.9
RAB40C-209ENST00000565511 PTPROQ16827 1216 aa26.91■■□□□ 1.9
RAB40C-209ENST00000565511 TIGD5Q53EQ6 642 aa26.91■■□□□ 1.9
RAB40C-209ENST00000565511 MCTP2Q6DN12 878 aa26.91■■□□□ 1.9
RAB40C-209ENST00000565511 NME8Q8N427 588 aa26.91■■□□□ 1.9
RAB40C-209ENST00000565511 TNPO1Q92973 898 aaKnown RBP26.91■■□□□ 1.9
RAB40C-209ENST00000565511 CSPG5O95196 566 aa26.9■■□□□ 1.9
RAB40C-209ENST00000565511 STK3Q13188 491 aa26.9■■□□□ 1.9
RAB40C-209ENST00000565511 PAN2Q504Q3 1202 aaKnown RBP26.9■■□□□ 1.9
RAB40C-209ENST00000565511 NPAS4Q8IUM7 802 aa26.9■■□□□ 1.9
RAB40C-209ENST00000565511 BICD2Q8TD16 824 aa26.9■■□□□ 1.9
RAB40C-209ENST00000565511 PCDHA10Q9Y5I2 948 aa26.9■■□□□ 1.9
RAB40C-209ENST00000565511 CYP46A1Q9Y6A2 500 aa26.9■■□□□ 1.9
RAB40C-209ENST00000565511 PLXNA4Q9HCM2 1894 aa26.89■■□□□ 1.9
RAB40C-209ENST00000565511 M0R2N6 131 aa26.89■■□□□ 1.9
RAB40C-209ENST00000565511 EPB41L2O43491 1005 aaKnown RBP26.89■■□□□ 1.9
RAB40C-209ENST00000565511 VTNP04004 478 aa26.89■■□□□ 1.9
RAB40C-209ENST00000565511 IBSPP21815 317 aaPredicted RBP26.89■■□□□ 1.9
RAB40C-209ENST00000565511 NLRP5P59047 1200 aa26.89■■□□□ 1.9
RAB40C-209ENST00000565511 COL19A1Q14993 1142 aa26.89■■□□□ 1.9
RAB40C-209ENST00000565511 KIZQ2M2Z5 673 aa26.89■■□□□ 1.9
RAB40C-209ENST00000565511 LEXMQ3ZCV2 418 aa26.89■■□□□ 1.9
RAB40C-209ENST00000565511 CKAP2LQ8IYA6 745 aa26.89■■□□□ 1.9
RAB40C-209ENST00000565511 SMAP1Q8IYB5 467 aaPredicted RBP26.89■■□□□ 1.9
RAB40C-209ENST00000565511 BBXQ8WY36 941 aaPredicted RBP26.89■■□□□ 1.9
RAB40C-209ENST00000565511 FTHL17Q9BXU8 183 aa26.89■■□□□ 1.9
RAB40C-209ENST00000565511 TM6SF1Q9BZW5 370 aa26.89■■□□□ 1.9
RAB40C-209ENST00000565511 SH3GLB2Q9NR46 395 aa26.89■■□□□ 1.9
RAB40C-209ENST00000565511 H3BQ06 376 aaPredicted RBP26.88■■□□□ 1.89
RAB40C-209ENST00000565511 TDP2O95551 362 aa26.88■■□□□ 1.89
RAB40C-209ENST00000565511 PSAPP07602 524 aa26.88■■□□□ 1.89
RAB40C-209ENST00000565511 IL9P15248 144 aa26.88■■□□□ 1.89
RAB40C-209ENST00000565511 CLCN3P51790 818 aa26.88■■□□□ 1.89
RAB40C-209ENST00000565511 SSRP1Q08945 709 aaKnown RBP26.88■■□□□ 1.89
RAB40C-209ENST00000565511 NFX1Q12986 1120 aaKnown RBP26.88■■□□□ 1.89
RAB40C-209ENST00000565511 CAMK1Q14012 370 aa26.88■■□□□ 1.89
RAB40C-209ENST00000565511 LINC01465Q8N7H1 131 aa26.88■■□□□ 1.89
RAB40C-209ENST00000565511 TBCKQ8TEA7 893 aa26.88■■□□□ 1.89
RAB40C-209ENST00000565511 SLC5A5Q92911 643 aa26.88■■□□□ 1.89
RAB40C-209ENST00000565511 OSMRQ99650 979 aa26.88■■□□□ 1.89
RAB40C-209ENST00000565511 UNC45AQ9H3U1 944 aa26.88■■□□□ 1.89
RAB40C-209ENST00000565511 NSUN3Q9H649 340 aaKnown RBP26.88■■□□□ 1.89
RAB40C-209ENST00000565511 CHMP2AO43633 222 aa26.87■■□□□ 1.89
RAB40C-209ENST00000565511 GPR32O75388 356 aa26.87■■□□□ 1.89
RAB40C-209ENST00000565511 RB1P06400 928 aa26.87■■□□□ 1.89
RAB40C-209ENST00000565511 DNAJB1P25685 340 aa26.87■■□□□ 1.89
RAB40C-209ENST00000565511 FAM228AQ86W67 206 aa26.87■■□□□ 1.89
RAB40C-209ENST00000565511 CMTR2Q8IYT2 770 aaKnown RBP26.87■■□□□ 1.89
RAB40C-209ENST00000565511 NEK9Q8TD19 979 aa26.87■■□□□ 1.89
RAB40C-209ENST00000565511 ZNF274Q96GC6 653 aaPredicted RBP26.87■■□□□ 1.89
RAB40C-209ENST00000565511 C11orf84Q9BUA3 381 aaPredicted RBP26.87■■□□□ 1.89
RAB40C-209ENST00000565511 EPHX3Q9H6B9 360 aa26.87■■□□□ 1.89
RAB40C-209ENST00000565511 ALG13Q9NP73 1137 aaKnown RBP26.87■■□□□ 1.89
RAB40C-209ENST00000565511 HCSTQ9UBK5 93 aa26.87■■□□□ 1.89
RAB40C-209ENST00000565511 PCDHA4Q9UN74 947 aa26.87■■□□□ 1.89
RAB40C-209ENST00000565511 WDR64B1ANS9 1081 aa26.86■■□□□ 1.89
RAB40C-209ENST00000565511 RPS6KA5O75582 802 aa26.86■■□□□ 1.89
RAB40C-209ENST00000565511 GTF2F1P35269 517 aaKnown RBP eCLIP26.86■■□□□ 1.894e-9■■■■■ 33
RAB40C-209ENST00000565511 DISC1Q9NRI5 854 aa26.86■■□□□ 1.89
RAB40C-209ENST00000565511 ST3GAL5Q9UNP4 418 aa26.86■■□□□ 1.89
RAB40C-209ENST00000565511 SARSP49591 514 aaKnown RBP26.85■■□□□ 1.89
RAB40C-209ENST00000565511 PRKCEQ02156 737 aa26.85■■□□□ 1.89
RAB40C-209ENST00000565511 TRIM22Q8IYM9 498 aa26.85■■□□□ 1.89
RAB40C-209ENST00000565511 LRRC71Q8N4P6 559 aa26.85■■□□□ 1.89
RAB40C-209ENST00000565511 METTL13Q8N6R0 699 aa26.85■■□□□ 1.89
RAB40C-209ENST00000565511 PDRG1Q9NUG6 133 aa26.85■■□□□ 1.89
RAB40C-209ENST00000565511 SAMM50Q9Y512 469 aa26.85■■□□□ 1.89
RAB40C-209ENST00000565511 GAS7O60861 476 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 DEXIO95424 95 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 OATP04181 439 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 ITGB1P05556 798 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 COL9A1P20849 921 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 LTBRP36941 435 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 USP11P51784 963 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 HYAL1Q12794 435 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 PTCRAQ6ISU1 281 aaPredicted RBP26.84■■□□□ 1.89
RAB40C-209ENST00000565511 BLIDQ8IZY5 108 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 DAGLBQ8NCG7 672 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 PABPC5Q96DU9 382 aaKnown RBP26.84■■□□□ 1.89
RAB40C-209ENST00000565511 ZNF668Q96K58 619 aaPredicted RBP26.84■■□□□ 1.89
RAB40C-209ENST00000565511 ADAM2Q99965 735 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 TCEAL9Q9UHQ7 104 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 KCNJ14Q9UNX9 436 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 PLAGL2Q9UPG8 496 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms