RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 JMJD4Q9H9V9 463 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 RGS18Q9NS28 235 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 ERAP1Q9NZ08 941 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 SPG21Q9NZD8 308 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 TRPV2Q9Y5S1 764 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 IGSF9BQ9UPX0 1349 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 GCOM1H8Y6P7 765 aaPredicted RBP10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 FIBPO43427 364 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 SMARCA5O60264 1052 aaPredicted RBP10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 DCNP07585 359 aaKnown RBP10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 CFHP08603 1231 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 POLR2MP0CAP2 368 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 PCP11498 1178 aaKnown RBP10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 HOXA13P31271 388 aaPredicted RBP10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 CA8P35219 290 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 TCF7P36402 384 aaPredicted RBP10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 IGBP1P78318 339 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 ZNF528Q3MIS6 628 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 MARCH8Q5T0T0 291 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 KCNT2Q6UVM3 1135 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 MFSD6Q6ZSS7 791 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 CCDC149Q6ZUS6 474 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 FCHSD1Q86WN1 690 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 IL31RAQ8NI17 732 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 ATRIPQ8WXE1 791 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 GLG1Q92896 1179 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 ADAM2Q99965 735 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 TMX1Q9H3N1 280 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 SMARCAD1Q9H4L7 1026 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 TBC1D17Q9HA65 648 aa10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 RALYQ9UKM9 306 aaKnown RBP10.45□□□□□ -0.74
VPS9D1-205ENST00000565452 MAP1BP46821 2468 aaKnown RBP10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 KRBA1A5PL33 1030 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 OPLAHO14841 1288 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 SPTLC1O15269 473 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 FGAP02671 866 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 PARP1P09874 1014 aaKnown RBP10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 FAM189BP81408 668 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 KRT76Q01546 638 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 SP4Q02446 784 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 CABP7Q86V35 215 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 PNMA1Q8ND90 353 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 SEPT1Q8WYJ6 367 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 NXPE3Q969Y0 559 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 INPP4AQ96PE3 977 aaPredicted RBP10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 ELAC1Q9H777 363 aaKnown RBP10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 KAT14Q9H8E8 782 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 ZBTB40Q9NUA8 1239 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 RTEL1Q9NZ71 1219 aa10.44□□□□□ -0.74
VPS9D1-205ENST00000565452 ATG2AQ2TAZ0 1938 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 GPR179Q6PRD1 2367 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 SPDYE4A6NLX3 237 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 TRIM6-TRIM34B2RNG4 842 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 C9IYK1 514 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 GPR182O15218 404 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 FOXP2O15409 715 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 HOXA2O43364 376 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 NARSO43776 548 aaKnown RBP10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 RPS6KA5O75582 802 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 MARK3P27448 753 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 PDE4AP27815 886 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 MRPS9P82933 396 aaKnown RBP10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 TMEM62Q0P6H9 643 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 GIT2Q14161 759 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 TMEM266Q2M3C6 531 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 PPM1JQ5JR12 505 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 KANK3Q6NY19 840 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 TMC5Q6UXY8 1006 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 GPR149Q86SP6 731 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 NLRX1Q86UT6 975 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 PPFIBP1Q86W92 1011 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 ABI1Q8IZP0 508 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 SLC44A3Q8N4M1 653 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 TMEM117Q9H0C3 514 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 TMEM161AQ9NX61 479 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 FBXO4Q9UKT5 387 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 CA14Q9ULX7 337 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 USP18Q9UMW8 372 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 PCDHGA2Q9Y5H1 932 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 PCDHA2Q9Y5H9 948 aa10.43□□□□□ -0.74
VPS9D1-205ENST00000565452 KDM3AQ9Y4C1 1321 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 LAMTOR5O43504 91 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 TBC1D4O60343 1298 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 FGFR1P11362 822 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 INSRRP14616 1297 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 ALDH7A1P49419 539 aaKnown RBP10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 NT5C2P49902 561 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 TSHZ3Q63HK5 1081 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 IQCA1Q86XH1 822 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 ESR2Q92731 530 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 SHDQ96IW2 340 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 RNF41Q9H4P4 317 aaPredicted RBP10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 DLGAP2Q9P1A6 1054 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 HCSTQ9UBK5 93 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 ST3GAL5Q9UNP4 418 aa10.42□□□□□ -0.74
VPS9D1-205ENST00000565452 ANKRD11Q6UB99 2663 aaPredicted RBP10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 MYH7BA7E2Y1 1941 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 SMIM35A0A1B0GVV1 85 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 GSTTP1A0A1W2PQM5 241 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 ZBTB5O15062 677 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms