RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 RFX1P22670 979 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 ICA1Q05084 483 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 RASA3Q14644 834 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 ZNF394Q53GI3 561 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 CABP7Q86V35 215 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 IFT74Q96LB3 600 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 TRIM47Q96LD4 638 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 PCDHA1Q9Y5I3 950 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 MYH3P11055 1940 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 ZNF500O60304 480 aaPredicted RBP3.66□□□□□ -1.82
CHD9-213ENST00000564845 ARP10275 920 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 ADRA2BP18089 450 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 DLG4P78352 724 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 ZNF449Q6P9G9 518 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 TMTC3Q6ZXV5 915 aa3.66□□□□□ -1.82
CHD9-213ENST00000564845 BZW1Q7L1Q6 419 aaKnown RBP3.66□□□□□ -1.82
CHD9-213ENST00000564845 ACSF2Q96CM8 615 aaPredicted RBP3.66□□□□□ -1.82
CHD9-213ENST00000564845 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.66□□□□□ -1.82
CHD9-213ENST00000564845 AJAP1Q9UKB5 411 aaPredicted RBP3.66□□□□□ -1.82
CHD9-213ENST00000564845 ESYT3A0FGR9 886 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 ATMINO43313 823 aaPredicted RBP3.65□□□□□ -1.82
CHD9-213ENST00000564845 SPP2Q13103 211 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 EML3Q32P44 896 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 ZNF569Q5MCW4 686 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 APLFQ8IW19 511 aaPredicted RBP3.65□□□□□ -1.82
CHD9-213ENST00000564845 SYCE1Q8N0S2 351 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 ANKRD35Q8N283 1001 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 SNX29Q8TEQ0 813 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 TMEM110-MUSTN1A8MSY1 372 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 EML1O00423 815 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 XPOTO43592 962 aaKnown RBP3.65□□□□□ -1.82
CHD9-213ENST00000564845 ATP9AO75110 1047 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 SNAPC5O75971 98 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 MAP3K6O95382 1288 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 KCNH2Q12809 1159 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 RAPGEF1Q13905 1077 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 ANGEL2Q5VTE6 544 aaKnown RBP3.65□□□□□ -1.82
CHD9-213ENST00000564845 RAD9BQ6WBX8 426 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 ZNF541Q9H0D2 1346 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 DNAJC8O75937 253 aaPredicted RBP3.65□□□□□ -1.82
CHD9-213ENST00000564845 GJB6O95452 261 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 TOP1P11387 765 aaKnown RBP3.65□□□□□ -1.82
CHD9-213ENST00000564845 NMT1P30419 496 aaKnown RBP3.65□□□□□ -1.82
CHD9-213ENST00000564845 HMGCS2P54868 508 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 ZBTB17Q13105 803 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 LAMB3Q13751 1172 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 STX1AQ16623 288 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 LGSNQ5TDP6 509 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 ZNF746Q6NUN9 644 aaPredicted RBP3.65□□□□□ -1.82
CHD9-213ENST00000564845 DTHD1Q6ZMT9 781 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 PPP4R3CPQ6ZMV5 832 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 KIAA1328Q86T90 577 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 TRIM42Q8IWZ5 723 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 ST13P5Q8NFI4 369 aaPredicted RBP3.65□□□□□ -1.82
CHD9-213ENST00000564845 TRAPPC12Q8WVT3 735 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 PSMD1Q99460 953 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 PSTPIP2Q9H939 334 aa3.65□□□□□ -1.82
CHD9-213ENST00000564845 IFNAR1P17181 557 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 RPL22P35268 128 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 GFPT1Q06210 699 aaPredicted RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 CXCL9Q07325 125 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 ARHGAP44Q17R89 818 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 QRICH1Q2TAL8 776 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 ARHGAP29Q52LW3 1261 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 TRIM50Q86XT4 487 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 TMCO5AQ8N6Q1 288 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 UHMK1Q8TAS1 419 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 CTNNBL1Q8WYA6 563 aaPredicted RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 LRRC4CQ9HCJ2 640 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 F7P08709 466 aaPredicted RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 FGFR4P22455 802 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 TRAPPC10P48553 1259 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 APBB2Q92870 758 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 HVCN1Q96D96 273 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 KIF9Q9HAQ2 790 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 MTMR4Q9NYA4 1195 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 SALL4Q9UJQ4 1053 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 HPSEQ9Y251 543 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 FAN1Q9Y2M0 1017 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 NRXN2Q9P2S2 1712 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 HNRNPRO43390 633 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 EFCAB14O75071 495 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 GMNNO75496 209 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 ELOA2Q8IYF1 753 aaPredicted RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 RASSF4Q9H2L5 321 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 MLXIPQ9HAP2 919 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 GPR108Q9NPR9 543 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 ABCB4P21439 1286 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 UBA7P41226 1012 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 HNRNPH2P55795 449 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 PCBP1Q15365 356 aaKnown RBP eCLIP3.65□□□□□ -1.839e-6■■■■■ 29.7
CHD9-213ENST00000564845 PRAMEF19Q5SWL8 479 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 UBAP2Q5T6F2 1119 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 STKLD1Q8NE28 680 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 CCDC124Q96CT7 223 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 PI4K2AQ9BTU6 479 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 OSBPL5Q9H0X9 879 aaPredicted RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 EXOC7Q9UPT5 735 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 ECM29Q5VYK3 1845 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 N4BP3O15049 544 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms