RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 GRB10Q13322 594 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 CTTNQ14247 550 aaKnown RBP18.93■□□□□ 0.62
CMTM3-208ENST00000564247 PPTC7Q8NI37 304 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 PNMA5Q96PV4 448 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 GPR20Q99678 358 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 MTG1Q9BT17 334 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-208ENST00000564247 ZNF302Q9NR11 478 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 GABBR1Q9UBS5 961 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 STK17AQ9UEE5 414 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 HOOK1Q9UJC3 728 aaKnown RBP18.93■□□□□ 0.62
CMTM3-208ENST00000564247 POTEB3A0JP26 581 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 PPFIA4O75335 1185 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 SLFN14P0C7P3 912 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 TCF7P36402 384 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-208ENST00000564247 PSMC6P62333 389 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 HSDL1Q3SXM5 330 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 LONRF3Q496Y0 759 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 TMEM119Q4V9L6 283 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 POTEBQ6S5H4 581 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 KRBA2Q6ZNG9 492 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 BANK1Q8NDB2 785 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 LXNQ9BS40 222 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 SERTAD1Q9UHV2 236 aa18.92■□□□□ 0.62
CMTM3-208ENST00000564247 A0A087X0B3 334 aa18.91■□□□□ 0.62
CMTM3-208ENST00000564247 TIMP1P01033 207 aa18.91■□□□□ 0.62
CMTM3-208ENST00000564247 XRCC6P12956 609 aaKnown RBP eCLIP18.91■□□□□ 0.62
CMTM3-208ENST00000564247 STAT5BP51692 787 aa18.91■□□□□ 0.62
CMTM3-208ENST00000564247 ECM1Q16610 540 aa18.91■□□□□ 0.62
CMTM3-208ENST00000564247 LRIT3Q3SXY7 679 aa18.91■□□□□ 0.62
CMTM3-208ENST00000564247 UTP14CQ5TAP6 766 aaKnown RBP18.91■□□□□ 0.62
CMTM3-208ENST00000564247 AFG1LQ8WV93 481 aa18.91■□□□□ 0.62
CMTM3-208ENST00000564247 LRRC27Q9C0I9 530 aa18.91■□□□□ 0.62
CMTM3-208ENST00000564247 MAGEF1Q9HAY2 307 aa18.91■□□□□ 0.62
CMTM3-208ENST00000564247 MYH9P35579 1960 aaKnown RBP18.91■□□□□ 0.62
CMTM3-208ENST00000564247 IGKV6D-21A0A0A0MT36 114 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 LYPLA2O95372 231 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 MMP3P08254 477 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 AMPD3Q01432 767 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 E2F4Q16254 413 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 DGKDQ16760 1214 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 PDXDC2PQ6P474 469 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 POTEGQ6S5H5 508 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 SV2BQ7L1I2 683 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 OTUD6AQ7L8S5 288 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 C4orf19Q8IY42 314 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 GLG1Q92896 1179 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 NUP62CLQ9H1M0 184 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 SMARCAD1Q9H4L7 1026 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 NRBP2Q9NSY0 501 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 TELO2Q9Y4R8 837 aa18.9■□□□□ 0.62
CMTM3-208ENST00000564247 B4GALT4O60513 344 aa18.89■□□□□ 0.61
CMTM3-208ENST00000564247 LGR5O75473 907 aa18.89■□□□□ 0.61
CMTM3-208ENST00000564247 SLC26A2P50443 739 aa18.89■□□□□ 0.61
CMTM3-208ENST00000564247 CCDC183Q5T5S1 534 aa18.89■□□□□ 0.61
CMTM3-208ENST00000564247 CAVIN1Q6NZI2 390 aaKnown RBP18.89■□□□□ 0.61
CMTM3-208ENST00000564247 PLPPR4Q7Z2D5 763 aa18.89■□□□□ 0.61
CMTM3-208ENST00000564247 CCDC60Q8IWA6 550 aaPredicted RBP18.89■□□□□ 0.61
CMTM3-208ENST00000564247 CKAP2LQ8IYA6 745 aa18.89■□□□□ 0.61
CMTM3-208ENST00000564247 ELOA2Q8IYF1 753 aaPredicted RBP18.89■□□□□ 0.61
CMTM3-208ENST00000564247 AFAP1L1Q8TED9 768 aa18.89■□□□□ 0.61
CMTM3-208ENST00000564247 LARP4BQ92615 738 aaKnown RBP18.89■□□□□ 0.61
CMTM3-208ENST00000564247 RAD54LQ92698 747 aa18.89■□□□□ 0.61
CMTM3-208ENST00000564247 CCDC43Q96MW1 224 aaKnown RBP18.89■□□□□ 0.61
CMTM3-208ENST00000564247 CLSTN2Q9H4D0 955 aa18.89■□□□□ 0.61
CMTM3-208ENST00000564247 BMP2KQ9NSY1 1161 aaPredicted RBP18.89■□□□□ 0.61
CMTM3-208ENST00000564247 MAFBQ9Y5Q3 323 aaPredicted RBP18.89■□□□□ 0.61
CMTM3-208ENST00000564247 E9PMD0 336 aa18.88■□□□□ 0.61
CMTM3-208ENST00000564247 SOX1O00570 391 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-208ENST00000564247 ACTN4O43707 911 aaKnown RBP18.88■□□□□ 0.61
CMTM3-208ENST00000564247 EYA4O95677 639 aa18.88■□□□□ 0.61
CMTM3-208ENST00000564247 SSBP05455 408 aaKnown RBP eCLIP18.88■□□□□ 0.61
CMTM3-208ENST00000564247 FPGSQ05932 587 aa18.88■□□□□ 0.61
CMTM3-208ENST00000564247 NBPF20Q3BBV1 942 aa18.88■□□□□ 0.61
CMTM3-208ENST00000564247 XKR3Q5GH77 459 aa18.88■□□□□ 0.61
CMTM3-208ENST00000564247 MFSD5Q6N075 450 aa18.88■□□□□ 0.61
CMTM3-208ENST00000564247 NFRKBQ6P4R8 1299 aa18.88■□□□□ 0.61
CMTM3-208ENST00000564247 TRPV6Q9H1D0 765 aa18.88■□□□□ 0.61
CMTM3-208ENST00000564247 TNMDQ9H2S6 317 aa18.88■□□□□ 0.61
CMTM3-208ENST00000564247 WDR81Q562E7 1941 aa18.88■□□□□ 0.61
CMTM3-208ENST00000564247 LETM1O95202 739 aaPredicted RBP18.87■□□□□ 0.61
CMTM3-208ENST00000564247 PLA2G4BP0C869 781 aa18.87■□□□□ 0.61
CMTM3-208ENST00000564247 HOXD8P13378 290 aaPredicted RBP18.87■□□□□ 0.61
CMTM3-208ENST00000564247 YWHABP31946 246 aaKnown RBP18.87■□□□□ 0.61
CMTM3-208ENST00000564247 AFMP43652 599 aa18.87■□□□□ 0.61
CMTM3-208ENST00000564247 PTPN11Q06124 597 aaPredicted RBP18.87■□□□□ 0.61
CMTM3-208ENST00000564247 DHX8Q14562 1220 aaKnown RBP18.87■□□□□ 0.61
CMTM3-208ENST00000564247 CAMK4Q16566 473 aa18.87■□□□□ 0.61
CMTM3-208ENST00000564247 UGCGQ16739 394 aa18.87■□□□□ 0.61
CMTM3-208ENST00000564247 NAALADL2Q58DX5 795 aa18.87■□□□□ 0.61
CMTM3-208ENST00000564247 PIGOQ8TEQ8 1089 aa18.87■□□□□ 0.61
CMTM3-208ENST00000564247 FAM167AQ96KS9 214 aa18.87■□□□□ 0.61
CMTM3-208ENST00000564247 ANKEF1Q9NU02 776 aa18.87■□□□□ 0.61
CMTM3-208ENST00000564247 BLOC1S4Q9NUP1 217 aa18.87■□□□□ 0.61
CMTM3-208ENST00000564247 ERAP1Q9NZ08 941 aa18.87■□□□□ 0.61
CMTM3-208ENST00000564247 DBR1Q9UK59 544 aaKnown RBP18.87■□□□□ 0.61
CMTM3-208ENST00000564247 ZNF215Q9UL58 517 aaPredicted RBP18.87■□□□□ 0.61
CMTM3-208ENST00000564247 EMSYQ7Z589 1322 aa18.86■□□□□ 0.61
CMTM3-208ENST00000564247 IGSF9BQ9UPX0 1349 aa18.86■□□□□ 0.61
CMTM3-208ENST00000564247 ARHGEF35A5YM69 484 aa18.86■□□□□ 0.61
CMTM3-208ENST00000564247 LGALS2P05162 132 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms