RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 TNFRSF8P28908 595 aa21.89■■□□□ 1.1
MSLN-205ENST00000563941 EPHB4P54760 987 aa21.89■■□□□ 1.1
MSLN-205ENST00000563941 CCDC174Q6PII3 467 aa21.89■■□□□ 1.1
MSLN-205ENST00000563941 CNKSR1Q969H4 720 aa21.89■■□□□ 1.1
MSLN-205ENST00000563941 SIX2Q9NPC8 291 aa21.89■■□□□ 1.1
MSLN-205ENST00000563941 ZMYM2Q9UBW7 1377 aa21.89■■□□□ 1.1
MSLN-205ENST00000563941 EIF3DO15371 548 aaKnown RBP eCLIP21.89■■□□□ 1.09
MSLN-205ENST00000563941 TGFB1I1O43294 461 aa21.89■■□□□ 1.09
MSLN-205ENST00000563941 PSMD10O75832 226 aa21.89■■□□□ 1.09
MSLN-205ENST00000563941 SLITRK3O94933 977 aa21.89■■□□□ 1.09
MSLN-205ENST00000563941 C7orf43Q8WVR3 580 aa21.89■■□□□ 1.09
MSLN-205ENST00000563941 GOPCQ9HD26 462 aa21.89■■□□□ 1.09
MSLN-205ENST00000563941 TMX2Q9Y320 296 aa21.89■■□□□ 1.09
MSLN-205ENST00000563941 PCDHB13Q9Y5F0 798 aa21.89■■□□□ 1.09
MSLN-205ENST00000563941 GCOM1H8Y6P7 765 aaPredicted RBP21.88■■□□□ 1.09
MSLN-205ENST00000563941 POLR2MP0CAP2 368 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 PRKCIP41743 596 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 PPP2R5CQ13362 524 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 C1orf186Q6ZWK4 172 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 TEX2Q8IWB9 1127 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 MYCT1Q8N699 235 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 SLC5A5Q92911 643 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 TMOD2Q9NZR1 351 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 GCNT4Q9P109 453 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 FBXL5Q9UKA1 691 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 AJAP1Q9UKB5 411 aaPredicted RBP21.88■■□□□ 1.09
MSLN-205ENST00000563941 NMT1P30419 496 aaKnown RBP21.88■■□□□ 1.09
MSLN-205ENST00000563941 UBXN2AP68543 259 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 EMBQ6PCB8 327 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 INPP4AQ96PE3 977 aaPredicted RBP21.88■■□□□ 1.09
MSLN-205ENST00000563941 NAGPAQ9UK23 515 aa21.88■■□□□ 1.09
MSLN-205ENST00000563941 PPIP5K2O43314 1243 aa21.87■■□□□ 1.09
MSLN-205ENST00000563941 RXRBP28702 533 aa21.87■■□□□ 1.09
MSLN-205ENST00000563941 PRELPP51888 382 aa21.87■■□□□ 1.09
MSLN-205ENST00000563941 JAM2P57087 298 aa21.87■■□□□ 1.09
MSLN-205ENST00000563941 SLC15A2Q16348 729 aa21.87■■□□□ 1.09
MSLN-205ENST00000563941 IKZF4Q9H2S9 585 aa21.87■■□□□ 1.09
MSLN-205ENST00000563941 CLRN2A0PK11 232 aa21.86■■□□□ 1.09
MSLN-205ENST00000563941 GTPBP10A4D1E9 387 aaKnown RBP21.86■■□□□ 1.09
MSLN-205ENST00000563941 ZBTB39O15060 712 aa21.86■■□□□ 1.09
MSLN-205ENST00000563941 ZC2HC1CQ53FD0 456 aaPredicted RBP21.86■■□□□ 1.09
MSLN-205ENST00000563941 BORCS6Q96GS4 357 aa21.86■■□□□ 1.09
MSLN-205ENST00000563941 RANBP17Q9H2T7 1088 aaKnown RBP21.86■■□□□ 1.09
MSLN-205ENST00000563941 PARVGQ9HBI0 331 aa21.86■■□□□ 1.09
MSLN-205ENST00000563941 CWC15Q9P013 229 aaKnown RBP21.86■■□□□ 1.09
MSLN-205ENST00000563941 GAS7O60861 476 aa21.86■■□□□ 1.09
MSLN-205ENST00000563941 RPS6KA5O75582 802 aa21.86■■□□□ 1.09
MSLN-205ENST00000563941 ALKBH5Q6P6C2 394 aaKnown RBP21.86■■□□□ 1.09
MSLN-205ENST00000563941 FAM186BQ8IYM0 893 aa21.86■■□□□ 1.09
MSLN-205ENST00000563941 CAVIN3Q969G5 261 aa21.86■■□□□ 1.09
MSLN-205ENST00000563941 ZBTB21Q9ULJ3 1066 aa21.86■■□□□ 1.09
MSLN-205ENST00000563941 PSME4Q14997 1843 aa21.86■■□□□ 1.09
MSLN-205ENST00000563941 FRMPD4Q14CM0 1322 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 SPDYE2BA6NHP3 402 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 SPDYE6P0CI01 402 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 ANXA13P27216 316 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 PSMC2P35998 433 aaKnown RBP21.85■■□□□ 1.09
MSLN-205ENST00000563941 GJB7Q6PEY0 223 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 IFT20Q8IY31 132 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 SUPT20HQ8NEM7 779 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 SHTN1A0MZ66 631 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 FLOT1O75955 427 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 GLI1P08151 1106 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 NFIL3Q16649 462 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 IFI16Q16666 785 aaKnown RBP21.85■■□□□ 1.09
MSLN-205ENST00000563941 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.85■■□□□ 1.09
MSLN-205ENST00000563941 DNAAF5Q86Y56 855 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 TSEN2Q8NCE0 465 aaKnown RBP21.85■■□□□ 1.09
MSLN-205ENST00000563941 TAF4BQ92750 862 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 EHMT1Q9H9B1 1298 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 GDF3Q9NR23 364 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 NENFQ9UMX5 172 aa21.85■■□□□ 1.09
MSLN-205ENST00000563941 HEXIM1O94992 359 aaKnown RBP21.84■■□□□ 1.09
MSLN-205ENST00000563941 RPS6KA1Q15418 735 aa21.84■■□□□ 1.09
MSLN-205ENST00000563941 CEP55Q53EZ4 464 aa21.84■■□□□ 1.09
MSLN-205ENST00000563941 CHURC1Q8WUH1 139 aa21.84■■□□□ 1.09
MSLN-205ENST00000563941 ZFP91Q96JP5 570 aaPredicted RBP21.84■■□□□ 1.09
MSLN-205ENST00000563941 KRT12Q99456 494 aa21.84■■□□□ 1.09
MSLN-205ENST00000563941 MRPL11Q9Y3B7 192 aaKnown RBP21.84■■□□□ 1.09
MSLN-205ENST00000563941 CES2O00748 559 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 PPP1R12BO60237 982 aaPredicted RBP21.83■■□□□ 1.09
MSLN-205ENST00000563941 IVLP07476 585 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 VIL1P09327 827 aaKnown RBP21.83■■□□□ 1.09
MSLN-205ENST00000563941 NOP2P46087 812 aaKnown RBP21.83■■□□□ 1.09
MSLN-205ENST00000563941 COG2Q14746 738 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 VPS36Q86VN1 386 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 KSR1Q8IVT5 923 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 FAM151AQ8WW52 585 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 FIZ1Q96SL8 496 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 ZNF577Q9BSK1 485 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 UNC45AQ9H3U1 944 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 WRAP73Q9P2S5 460 aaPredicted RBP21.83■■□□□ 1.09
MSLN-205ENST00000563941 SEL1LQ9UBV2 794 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 ZNF70Q9UC06 446 aaPredicted RBP21.83■■□□□ 1.09
MSLN-205ENST00000563941 ATP8B3O60423 1300 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 UBE4BO95155 1302 aa21.83■■□□□ 1.09
MSLN-205ENST00000563941 GOLGA6CA6NDK9 693 aa21.83■■□□□ 1.08
MSLN-205ENST00000563941 KIF4AO95239 1232 aa21.83■■□□□ 1.08
MSLN-205ENST00000563941 GOLGA6DP0CG33 693 aa21.83■■□□□ 1.08
MSLN-205ENST00000563941 MUTP22033 750 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms