RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 P2RX5Q93086 422 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 PHKBQ93100 1093 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 ZBTB10Q96DT7 871 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 MAP7D2Q96T17 732 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 C1orf112Q9NSG2 853 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 NRBP2Q9NSY0 501 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 HCN4Q9Y3Q4 1203 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 CYP46A1Q9Y6A2 500 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 TRANK1O15050 2925 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 RALGAPA2Q2PPJ7 1873 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 VCANP13611 3396 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 NLRC5Q86WI3 1866 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 EPB41L2O43491 1005 aaKnown RBP10.81□□□□□ -0.68
CLN6-203ENST00000563917 CSPG5O95196 566 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 ALADP13716 330 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 IFNAR1P17181 557 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 SARSP49591 514 aaKnown RBP10.81□□□□□ -0.68
CLN6-203ENST00000563917 CCT2P78371 535 aaKnown RBP10.81□□□□□ -0.68
CLN6-203ENST00000563917 SSRP1Q08945 709 aaKnown RBP10.81□□□□□ -0.68
CLN6-203ENST00000563917 PAN2Q504Q3 1202 aaKnown RBP10.81□□□□□ -0.68
CLN6-203ENST00000563917 FAM178BQ8IXR5 827 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.81□□□□□ -0.68
CLN6-203ENST00000563917 ZNF689Q96CS4 500 aaPredicted RBP10.81□□□□□ -0.68
CLN6-203ENST00000563917 SCLT1Q96NL6 688 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 UPF3BQ9BZI7 483 aaKnown RBP10.81□□□□□ -0.68
CLN6-203ENST00000563917 IGFLR1Q9H665 355 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 SH3GLB2Q9NR46 395 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 GABBR1Q9UBS5 961 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 AKT3Q9Y243 479 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 PCDHB12Q9Y5F1 795 aa10.81□□□□□ -0.68
CLN6-203ENST00000563917 IGLV3-22A0A075B6J6 115 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 GRXCR2A6NFK2 248 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 GRM6O15303 877 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 DHX15O43143 795 aaKnown RBP10.8□□□□□ -0.68
CLN6-203ENST00000563917 GAS7O60861 476 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 MMP1P03956 469 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 ZSCAN20P17040 1043 aaPredicted RBP10.8□□□□□ -0.68
CLN6-203ENST00000563917 SFNP31947 248 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 CIITAP33076 1130 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 USP11P51784 963 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 JAK3P52333 1124 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 CRYBB1P53674 252 aaPredicted RBP10.8□□□□□ -0.68
CLN6-203ENST00000563917 PKN1Q16512 942 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 CSPP1Q1MSJ5 1256 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 KIZQ2M2Z5 673 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 TMEM266Q2M3C6 531 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 SLC24A5Q71RS6 500 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 RUFY3Q7L099 469 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 KIAA0319LQ8IZA0 1049 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 NEK9Q8TD19 979 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 MICAL1Q8TDZ2 1067 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 UIMC1Q96RL1 719 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 POP1Q99575 1024 aaKnown RBP10.8□□□□□ -0.68
CLN6-203ENST00000563917 ADAM2Q99965 735 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 TEKT3Q9BXF9 490 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 EPHX3Q9H6B9 360 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 ATP6V0A4Q9HBG4 840 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 ALG13Q9NP73 1137 aaKnown RBP10.8□□□□□ -0.68
CLN6-203ENST00000563917 DISC1Q9NRI5 854 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 VPS54Q9P1Q0 977 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 PRKAG3Q9UGI9 489 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 PLAGL2Q9UPG8 496 aa10.8□□□□□ -0.68
CLN6-203ENST00000563917 NOC2LQ9Y3T9 749 aaKnown RBP10.8□□□□□ -0.68
CLN6-203ENST00000563917 MAFBQ9Y5Q3 323 aaPredicted RBP10.8□□□□□ -0.68
CLN6-203ENST00000563917 MRPL42Q9Y6G3 142 aaKnown RBP10.8□□□□□ -0.68
CLN6-203ENST00000563917 NID2Q14112 1375 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 TTC3P53804 2025 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 FSD2A1L4K1 749 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 HOXA2O43364 376 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 CHMP2AO43633 222 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 PPFIA3O75145 1194 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 CDKL5O76039 1030 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 IL9P15248 144 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 XBP1P17861 261 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 PDIA3P30101 505 aaKnown RBP10.79□□□□□ -0.68
CLN6-203ENST00000563917 NDUFV1P49821 464 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 TBC1D8BQ0IIM8 1120 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 LRCH2Q5VUJ6 765 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 EFCAB12Q6NXP0 572 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 RTN4RL1Q86UN2 441 aaPredicted RBP10.79□□□□□ -0.68
CLN6-203ENST00000563917 ABI1Q8IZP0 508 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 RASGRP4Q8TDF6 673 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 LINC01599Q8WXQ3 324 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 FAM122AQ96E09 287 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 PPP1R16BQ96T49 567 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 RIT2Q99578 217 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 OSMRQ99650 979 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 AGXT2Q9BYV1 514 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 RC3H2Q9HBD1 1191 aaKnown RBP10.79□□□□□ -0.68
CLN6-203ENST00000563917 ERVK-5Q9HDB9 667 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 ST3GAL5Q9UNP4 418 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 BDP1A6H8Y1 2624 aa10.79□□□□□ -0.68
CLN6-203ENST00000563917 MYH9P35579 1960 aaKnown RBP10.78□□□□□ -0.68
CLN6-203ENST00000563917 TBKBP1A7MCY6 615 aa10.78□□□□□ -0.68
CLN6-203ENST00000563917 PI4K2BG5E9Z4 385 aa10.78□□□□□ -0.68
CLN6-203ENST00000563917 RBAK-RBAKDNI3L0D1 243 aa10.78□□□□□ -0.68
CLN6-203ENST00000563917 GPR37L1O60883 481 aa10.78□□□□□ -0.68
CLN6-203ENST00000563917 DEXIO95424 95 aa10.78□□□□□ -0.68
CLN6-203ENST00000563917 C22orf31O95567 290 aa10.78□□□□□ -0.68
CLN6-203ENST00000563917 OATP04181 439 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms