RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 M0QZ92 97 aa18.31■□□□□ 0.52
RNF40-205ENST00000563909 STK25O00506 426 aa18.31■□□□□ 0.52
RNF40-205ENST00000563909 FIBPO43427 364 aa18.31■□□□□ 0.52
RNF40-205ENST00000563909 RPLP2P05387 115 aaKnown RBP18.31■□□□□ 0.52
RNF40-205ENST00000563909 PCP11498 1178 aaKnown RBP18.31■□□□□ 0.52
RNF40-205ENST00000563909 PLCB3Q01970 1234 aa18.31■□□□□ 0.52
RNF40-205ENST00000563909 BMP2KLQ5H9B9 411 aa18.31■□□□□ 0.52
RNF40-205ENST00000563909 RARS2Q5T160 578 aaKnown RBP18.31■□□□□ 0.52
RNF40-205ENST00000563909 TMC7Q7Z402 723 aa18.31■□□□□ 0.52
RNF40-205ENST00000563909 RIN2Q8WYP3 895 aaPredicted RBP18.31■□□□□ 0.52
RNF40-205ENST00000563909 ESR2Q92731 530 aa18.31■□□□□ 0.52
RNF40-205ENST00000563909 USTQ9Y2C2 406 aa18.31■□□□□ 0.52
RNF40-205ENST00000563909 MAP1BP46821 2468 aaKnown RBP18.31■□□□□ 0.52
RNF40-205ENST00000563909 DOCK5Q9H7D0 1870 aa18.31■□□□□ 0.52
RNF40-205ENST00000563909 ZMYM6O95789 1325 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 IGSF9BQ9UPX0 1349 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 STAM2O75886 525 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 LAG3P18627 525 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 NFX1Q12986 1120 aaKnown RBP18.3■□□□□ 0.52
RNF40-205ENST00000563909 TDGQ13569 410 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 TMEM266Q2M3C6 531 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 ATAT1Q5SQI0 421 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 TBC1D10CQ8IV04 446 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 C12orf76Q8N812 135 aaPredicted RBP18.3■□□□□ 0.52
RNF40-205ENST00000563909 CWH43Q9H720 699 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 CYP26B1Q9NR63 512 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 DIAPH3Q9NSV4 1193 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 ERAP1Q9NZ08 941 aa18.3■□□□□ 0.52
RNF40-205ENST00000563909 EOMESO95936 686 aa18.29■□□□□ 0.52
RNF40-205ENST00000563909 KANK3Q6NY19 840 aa18.29■□□□□ 0.52
RNF40-205ENST00000563909 ZC3H14Q6PJT7 736 aaKnown RBP18.29■□□□□ 0.52
RNF40-205ENST00000563909 ZNF589Q86UQ0 364 aaPredicted RBP18.29■□□□□ 0.52
RNF40-205ENST00000563909 MRPL43Q8N983 215 aaKnown RBP18.29■□□□□ 0.52
RNF40-205ENST00000563909 GLG1Q92896 1179 aa18.29■□□□□ 0.52
RNF40-205ENST00000563909 SENP7Q9BQF6 1050 aa18.29■□□□□ 0.52
RNF40-205ENST00000563909 CELF4Q9BZC1 486 aaKnown RBP18.29■□□□□ 0.52
RNF40-205ENST00000563909 RNF216Q9NWF9 866 aaPredicted RBP18.29■□□□□ 0.52
RNF40-205ENST00000563909 USP24Q9UPU5 2620 aa18.29■□□□□ 0.52
RNF40-205ENST00000563909 NEDD4P46934 1319 aa18.28■□□□□ 0.52
RNF40-205ENST00000563909 DENND3A2RUS2 1198 aa18.28■□□□□ 0.52
RNF40-205ENST00000563909 ZBTB5O15062 677 aa18.28■□□□□ 0.52
RNF40-205ENST00000563909 MGEA5O60502 916 aa18.28■□□□□ 0.52
RNF40-205ENST00000563909 CLASP2O75122 1294 aaKnown RBP18.28■□□□□ 0.52
RNF40-205ENST00000563909 KRT17Q04695 432 aa18.28■□□□□ 0.52
RNF40-205ENST00000563909 CCDC178Q5BJE1 867 aa18.28■□□□□ 0.52
RNF40-205ENST00000563909 KIAA1841Q6NSI8 718 aa18.28■□□□□ 0.52
RNF40-205ENST00000563909 IQCA1Q86XH1 822 aa18.28■□□□□ 0.52
RNF40-205ENST00000563909 STAG2Q8N3U4 1231 aa18.28■□□□□ 0.52
RNF40-205ENST00000563909 ADAM2Q99965 735 aa18.28■□□□□ 0.52
RNF40-205ENST00000563909 RNF41Q9H4P4 317 aaPredicted RBP18.28■□□□□ 0.52
RNF40-205ENST00000563909 FNDC1Q4ZHG4 1894 aaPredicted RBP18.28■□□□□ 0.52
RNF40-205ENST00000563909 C2orf71A6NGG8 1288 aa18.27■□□□□ 0.52
RNF40-205ENST00000563909 RRN3P2A6NIE6 340 aa18.27■□□□□ 0.52
RNF40-205ENST00000563909 FGFR1P11362 822 aa18.27■□□□□ 0.52
RNF40-205ENST00000563909 INSRRP14616 1297 aa18.27■□□□□ 0.52
RNF40-205ENST00000563909 RFX1P22670 979 aa18.27■□□□□ 0.52
RNF40-205ENST00000563909 NMIQ13287 307 aaPredicted RBP18.27■□□□□ 0.52
RNF40-205ENST00000563909 SMC1AQ14683 1233 aaKnown RBP18.27■□□□□ 0.52
RNF40-205ENST00000563909 SLC24A5Q71RS6 500 aa18.27■□□□□ 0.52
RNF40-205ENST00000563909 GIMAP8Q8ND71 665 aaPredicted RBP18.27■□□□□ 0.52
RNF40-205ENST00000563909 ACSF2Q96CM8 615 aaPredicted RBP18.27■□□□□ 0.52
RNF40-205ENST00000563909 MTMR8Q96EF0 704 aa18.27■□□□□ 0.52
RNF40-205ENST00000563909 DUSP12Q9UNI6 340 aa18.27■□□□□ 0.52
RNF40-205ENST00000563909 ATRXP46100 2492 aa18.27■□□□□ 0.51
RNF40-205ENST00000563909 GSTTP1A0A1W2PQM5 241 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 KLRF2D3W0D1 207 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 CA8P35219 290 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 PBX3P40426 434 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 ATXN1P54253 815 aaKnown RBP18.26■□□□□ 0.51
RNF40-205ENST00000563909 MFAP1P55081 439 aaKnown RBP18.26■□□□□ 0.51
RNF40-205ENST00000563909 XRRA1Q6P2D8 792 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 KCNT2Q6UVM3 1135 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 CWC27Q6UX04 472 aaKnown RBP18.26■□□□□ 0.51
RNF40-205ENST00000563909 ENAHQ8N8S7 591 aaPredicted RBP18.26■□□□□ 0.51
RNF40-205ENST00000563909 RUFY2Q8WXA3 655 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 SEPT1Q8WYJ6 367 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 ZSCAN10Q96SZ4 725 aaPredicted RBP18.26■□□□□ 0.51
RNF40-205ENST00000563909 SMARCAD1Q9H4L7 1026 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 KCNK12Q9HB15 430 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 ATP6V0A4Q9HBG4 840 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 RGS18Q9NS28 235 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 C1orf112Q9NSG2 853 aa18.26■□□□□ 0.51
RNF40-205ENST00000563909 SP9P0CG40 484 aa18.25■□□□□ 0.51
RNF40-205ENST00000563909 SDHBP21912 280 aa18.25■□□□□ 0.51
RNF40-205ENST00000563909 CHMLP26374 656 aa18.25■□□□□ 0.51
RNF40-205ENST00000563909 KRT76Q01546 638 aa18.25■□□□□ 0.51
RNF40-205ENST00000563909 KIAA0319Q5VV43 1072 aa18.25■□□□□ 0.51
RNF40-205ENST00000563909 HOMER1Q86YM7 354 aa18.25■□□□□ 0.51
RNF40-205ENST00000563909 ZNF558Q96NG5 402 aa18.25■□□□□ 0.51
RNF40-205ENST00000563909 DZANK1Q9NVP4 752 aa18.25■□□□□ 0.51
RNF40-205ENST00000563909 SPG21Q9NZD8 308 aa18.25■□□□□ 0.51
RNF40-205ENST00000563909 FRMPD4Q14CM0 1322 aa18.24■□□□□ 0.51
RNF40-205ENST00000563909 C9IYK1 514 aa18.24■□□□□ 0.51
RNF40-205ENST00000563909 ZNF213O14771 459 aa18.24■□□□□ 0.51
RNF40-205ENST00000563909 PPM1AP35813 382 aa18.24■□□□□ 0.51
RNF40-205ENST00000563909 TRAF1Q13077 416 aa18.24■□□□□ 0.51
RNF40-205ENST00000563909 SPECC1Q5M775 1068 aa18.24■□□□□ 0.51
RNF40-205ENST00000563909 LRRC55Q6ZSA7 311 aa18.24■□□□□ 0.51
RNF40-205ENST00000563909 OTOP3Q7RTS5 596 aa18.24■□□□□ 0.51
RNF40-205ENST00000563909 SUMF1Q8NBK3 374 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms