RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 TLR3O15455 904 aaKnown RBP16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 ZNF500O60304 480 aaPredicted RBP16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 CAVIN2O95810 425 aa16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 CYP2C18P33260 490 aa16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 FXR2P51116 673 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 EPHB4P54760 987 aa16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 PTPAQ15257 358 aa16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 EPHA7Q15375 998 aa16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 TARBP2Q15633 366 aaKnown RBP16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 FAM160B1Q5W0V3 765 aa16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 RUFY4Q6ZNE9 571 aa16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 BANK1Q8NDB2 785 aa16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 HIPK3Q9H422 1215 aa16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 RGL1Q9NZL6 768 aa16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 TFIP11Q9UBB9 837 aaKnown RBP16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 SAMM50Q9Y512 469 aa16.53■□□□□ 0.24
SCAMP2-203ENST00000563663 PITPNM1O00562 1244 aa16.52■□□□□ 0.24
SCAMP2-203ENST00000563663 SPATA31C1P0DKV0 1188 aa16.52■□□□□ 0.24
SCAMP2-203ENST00000563663 PTK7Q13308 1070 aa16.52■□□□□ 0.24
SCAMP2-203ENST00000563663 NCAPH2Q6IBW4 605 aa16.52■□□□□ 0.24
SCAMP2-203ENST00000563663 IGSF22Q8N9C0 903 aa16.52■□□□□ 0.24
SCAMP2-203ENST00000563663 BBXQ8WY36 941 aaPredicted RBP16.52■□□□□ 0.24
SCAMP2-203ENST00000563663 BADQ92934 168 aa16.52■□□□□ 0.24
SCAMP2-203ENST00000563663 ATP6V0A1Q93050 837 aa16.52■□□□□ 0.24
SCAMP2-203ENST00000563663 PPP1R12CQ9BZL4 782 aa16.52■□□□□ 0.24
SCAMP2-203ENST00000563663 HBP1O60381 514 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 SLITRK3O94933 977 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 OATP04181 439 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 PRPHP41219 470 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 MBTPS1Q14703 1052 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 ANO5Q75V66 913 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 LINC01465Q8N7H1 131 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 LXNQ9BS40 222 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 CLSTN2Q9H4D0 955 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 TUBE1Q9UJT0 475 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 ZKSCAN5Q9Y2L8 839 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 COL1A2P08123 1366 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 LAD1O00515 517 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 C22orf31O95567 290 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 LIG1P18858 919 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 TECP42680 631 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 QARSP47897 775 aaKnown RBP16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 MDM2Q00987 491 aaPredicted RBP16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 MFSD5Q6N075 450 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 C16orf59Q7L2K0 433 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 RPAINQ86UA6 219 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 DYDC2Q96IM9 177 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 EIF2AK1Q9BQI3 630 aaKnown RBP16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 NIFKQ9BYG3 293 aaKnown RBP16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 OSBPL7Q9BZF2 842 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 TCEAL9Q9UHQ7 104 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 TRPC6Q9Y210 931 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 CLIC4Q9Y696 253 aa16.51■□□□□ 0.23
SCAMP2-203ENST00000563663 CHD9Q3L8U1 2897 aa16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 LYPLA2O95372 231 aa16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 P4HBP07237 508 aaKnown RBP16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 CKBP12277 381 aa16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 PSMC5P62195 406 aa16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 CYP4A11Q02928 519 aa16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 C4orf19Q8IY42 314 aa16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 CAGE1Q8TC20 777 aa16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 USP28Q96RU2 1077 aa16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 MMTAG2Q9BU76 263 aaKnown RBP16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 DACT1Q9NYF0 836 aa16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 CHD7Q9P2D1 2997 aa16.5■□□□□ 0.23
SCAMP2-203ENST00000563663 ZBTB39O15060 712 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 MED24O75448 989 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 RAG1P15918 1043 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 GRIN1Q05586 938 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 CTTNQ14247 550 aaKnown RBP16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 SF3A1Q15459 793 aaKnown RBP16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 ECM1Q16610 540 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 MTHFD1LQ6UB35 978 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 ZNF579Q8NAF0 562 aaKnown RBP16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 FAM167AQ96KS9 214 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 TNMDQ9H2S6 317 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 MORC2Q9Y6X9 1032 aaPredicted RBP16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 PTPRSQ13332 1948 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 RRN3P2A6NIE6 340 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 PP2D1A8MPX8 630 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 IQCF3P0C7M6 154 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 CSF2RAP15509 400 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 BMP8BP34820 402 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 CCL23P55773 120 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 IGBP1P78318 339 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 XKR3Q5GH77 459 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 ZNF484Q5JVG2 852 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 ZNF618Q5T7W0 954 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 ARL6IP4Q66PJ3 421 aaKnown RBP16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 CATSPER3Q86XQ3 398 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 SCLYQ96I15 445 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 SH2D3AQ9BRG2 576 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 PCDHA2Q9Y5H9 948 aa16.49■□□□□ 0.23
SCAMP2-203ENST00000563663 IGKV6-21A0A0C4DH24 114 aa16.48■□□□□ 0.23
SCAMP2-203ENST00000563663 MARCH6O60337 910 aa16.48■□□□□ 0.23
SCAMP2-203ENST00000563663 GNAT1P11488 350 aa16.48■□□□□ 0.23
SCAMP2-203ENST00000563663 MGAT3Q09327 533 aa16.48■□□□□ 0.23
SCAMP2-203ENST00000563663 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
SCAMP2-203ENST00000563663 PDIA5Q14554 519 aa16.48■□□□□ 0.23
SCAMP2-203ENST00000563663 PLA2G4FQ68DD2 849 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms