RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 PIK3R6Q5UE93 754 aa5.48□□□□□ -1.53
GDE1-202ENST00000563645 OTOP2Q7RTS6 562 aa5.48□□□□□ -1.53
GDE1-202ENST00000563645 CALML6Q8TD86 181 aa5.48□□□□□ -1.53
GDE1-202ENST00000563645 BORCS6Q96GS4 357 aa5.48□□□□□ -1.53
GDE1-202ENST00000563645 C8orf49Q96NF6 230 aa5.48□□□□□ -1.53
GDE1-202ENST00000563645 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
GDE1-202ENST00000563645 INTS7Q9NVH2 962 aaKnown RBP5.48□□□□□ -1.53
GDE1-202ENST00000563645 MAGEC2Q9UBF1 373 aaPredicted RBP5.48□□□□□ -1.53
GDE1-202ENST00000563645 CD2APQ9Y5K6 639 aa5.48□□□□□ -1.53
GDE1-202ENST00000563645 CBX4O00257 560 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 TRAF5O00463 557 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 JMJD7P0C870 316 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 FNTBP49356 437 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 KCNQ1P51787 676 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 KIF11P52732 1056 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 RRADP55042 308 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 CD83Q01151 205 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 ZMAT1Q5H9K5 638 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 CDCA2Q69YH5 1023 aaPredicted RBP5.47□□□□□ -1.53
GDE1-202ENST00000563645 TMEM200BQ69YZ2 307 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 C16orf86Q6ZW13 317 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 UBE2R2Q712K3 238 aaPredicted RBP5.47□□□□□ -1.53
GDE1-202ENST00000563645 RTN4RL1Q86UN2 441 aaPredicted RBP5.47□□□□□ -1.53
GDE1-202ENST00000563645 APPBP2Q92624 585 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 FOXRED1Q96CU9 486 aaPredicted RBP5.47□□□□□ -1.53
GDE1-202ENST00000563645 SCYL1Q96KG9 808 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 FOXB1Q99853 325 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 PTPN18Q99952 460 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 FANCLQ9NW38 375 aa5.47□□□□□ -1.53
GDE1-202ENST00000563645 A0A0G2JNJ9 132 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 PTPDC1A2A3K4 754 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 GOLGA6L22H0YM25 854 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 H7C1D1 291 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 DVL2O14641 736 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 MAFO75444 373 aaPredicted RBP5.46□□□□□ -1.54
GDE1-202ENST00000563645 ALDH6A1Q02252 535 aaKnown RBP5.46□□□□□ -1.54
GDE1-202ENST00000563645 ICAM4Q14773 271 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 EIF4HQ15056 248 aaKnown RBP5.46□□□□□ -1.54
GDE1-202ENST00000563645 TKFCQ3LXA3 575 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 JAZF1Q86VZ6 243 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 CHST13Q8NET6 341 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 DNERQ8NFT8 737 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 ERCC4Q92889 916 aaPredicted RBP5.46□□□□□ -1.54
GDE1-202ENST00000563645 E2F7Q96AV8 911 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 LMF1Q96S06 567 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 C1QTNF3Q9BXJ4 246 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 PCIF1Q9H4Z3 704 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 B4GALT6Q9UBX8 382 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 Q9UFV3 132 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 ST6GALNAC2Q9UJ37 374 aa5.46□□□□□ -1.54
GDE1-202ENST00000563645 CDC45O75419 566 aa5.45□□□□□ -1.54
GDE1-202ENST00000563645 ZNF20P17024 532 aa5.45□□□□□ -1.54
GDE1-202ENST00000563645 APEX1P27695 318 aaKnown RBP5.45□□□□□ -1.54
GDE1-202ENST00000563645 MOGSQ13724 837 aa5.45□□□□□ -1.54
GDE1-202ENST00000563645 CFAP100Q494V2 611 aa5.45□□□□□ -1.54
GDE1-202ENST00000563645 GRAMD4Q6IC98 578 aa5.45□□□□□ -1.54
GDE1-202ENST00000563645 DBX2Q6ZNG2 339 aa5.45□□□□□ -1.54
GDE1-202ENST00000563645 LARP4Q71RC2 724 aaKnown RBP eCLIP5.45□□□□□ -1.54
GDE1-202ENST00000563645 KIAA1958Q8N8K9 716 aa5.45□□□□□ -1.54
GDE1-202ENST00000563645 NEIL1Q96FI4 390 aaPredicted RBP5.45□□□□□ -1.54
GDE1-202ENST00000563645 LRRC37BQ96QE4 947 aa5.45□□□□□ -1.54
GDE1-202ENST00000563645 KIAA1683Q9H0B3 1180 aa5.45□□□□□ -1.54
GDE1-202ENST00000563645 CD248Q9HCU0 757 aa5.45□□□□□ -1.54
GDE1-202ENST00000563645 ACSS2Q9NR19 701 aa5.45□□□□□ -1.54
GDE1-202ENST00000563645 MRPL42Q9Y6G3 142 aaKnown RBP5.45□□□□□ -1.54
GDE1-202ENST00000563645 PATE3B3GLJ2 98 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 PRLP01236 227 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 RAC3P60763 192 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 MAP3K12Q12852 859 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 NFYCQ13952 458 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 ZNF174Q15697 407 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 RNF151Q2KHN1 245 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 AGBL4Q5VU57 503 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 CREB3L3Q68CJ9 461 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 TRIM68Q6AZZ1 485 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 NINJ1Q92982 152 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 DVL3Q92997 716 aaPredicted RBP5.44□□□□□ -1.54
GDE1-202ENST00000563645 GPR20Q99678 358 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 ORAI3Q9BRQ5 295 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 CDC42EP3Q9UKI2 254 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 OAZ3Q9UMX2 235 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 NR2E1Q9Y466 385 aa5.44□□□□□ -1.54
GDE1-202ENST00000563645 UBA6A0AVT1 1052 aaPredicted RBP5.43□□□□□ -1.54
GDE1-202ENST00000563645 ARHGAP6O43182 974 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 KPNA6O60684 536 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 CYP17A1P05093 508 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 SELENOPP49908 381 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 MEOX1P50221 254 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 ROM1Q03395 351 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 PCOLCEQ15113 449 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 EPHA7Q15375 998 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 C21orf62-AS1Q17RA5 79 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 FILIP1Q7Z7B0 1213 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 NIM1KQ8IY84 436 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 RTKN2Q8IZC4 609 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 GNRHR2Q96P88 292 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 FEZ1Q99689 392 aa5.43□□□□□ -1.54
GDE1-202ENST00000563645 FAM83GA6ND36 823 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 C1QTNF3-AMACRE9PGA6 284 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 POU3F2P20265 443 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms