RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PPP1R7Q15435 360 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 SLC30A10Q6XR72 485 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 SLF2Q8IX21 1173 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 FMO2Q99518 471 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 BHMT2Q9H2M3 363 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 DHX36Q9H2U1 1008 aaKnown RBP12.86□□□□□ -0.35
ABCA3-203ENST00000563623 RIOX1Q9H6W3 641 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 OSGEPQ9NPF4 335 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 LEMD3Q9Y2U8 911 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 ITGB4P16144 1822 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 KIF1CO43896 1103 aaKnown RBP12.85□□□□□ -0.35
ABCA3-203ENST00000563623 FAM13AO94988 1023 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 GALCP54803 685 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 UAP1Q16222 522 aaPredicted RBP12.85□□□□□ -0.35
ABCA3-203ENST00000563623 COBLL1Q53SF7 1204 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 MYCT1Q8N699 235 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 GLG1Q92896 1179 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 GANQ9H2C0 597 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 IKZF4Q9H2S9 585 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 AIPL1Q9NZN9 384 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 GGA1Q9UJY5 639 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 BZW2Q9Y6E2 419 aaKnown RBP12.85□□□□□ -0.35
ABCA3-203ENST00000563623 PLCH1Q4KWH8 1693 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 ESYT2A0FGR8 921 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 RBAK-RBAKDNI3L0D1 243 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 CHUKO15111 745 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 PON1P27169 355 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 RBM5P52756 815 aaKnown RBP eCLIP12.85□□□□□ -0.35
ABCA3-203ENST00000563623 PPP4CP60510 307 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 TCP10Q12799 353 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 SEPT2Q15019 361 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 MAEAQ7L5Y9 396 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 KSR1Q8IVT5 923 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 SYCE1Q8N0S2 351 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 MREGQ8N565 214 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 TMOD4Q9NZQ9 345 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 CNOT8Q9UFF9 292 aaKnown RBP12.85□□□□□ -0.35
ABCA3-203ENST00000563623 CHORDC1Q9UHD1 332 aaPredicted RBP12.85□□□□□ -0.35
ABCA3-203ENST00000563623 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.85□□□□□ -0.35
ABCA3-203ENST00000563623 BUB1BO60566 1050 aaPredicted RBP12.85□□□□□ -0.35
ABCA3-203ENST00000563623 FSBPO95073 299 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 RPSAP08865 295 aaKnown RBP12.85□□□□□ -0.35
ABCA3-203ENST00000563623 GPSM2P81274 684 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 BIRC3Q13489 604 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 SNCBQ16143 134 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 KNOP1Q1ED39 458 aaKnown RBP12.85□□□□□ -0.35
ABCA3-203ENST00000563623 ZCWPW2Q504Y3 356 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 SLC10A5Q5PT55 438 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 PTF1AQ7RTS3 328 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 PIGOQ8TEQ8 1089 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 PSMD1Q99460 953 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 BCAS3Q9H6U6 928 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 VCPKMTQ9H867 229 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 NARFQ9UHQ1 456 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 DAAM1Q9Y4D1 1078 aa12.85□□□□□ -0.35
ABCA3-203ENST00000563623 ANKRD36CQ5JPF3 1778 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 IRF6O14896 467 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 TTLL1O95922 423 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 NR3C1P04150 777 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 TAL1P17542 331 aaPredicted RBP12.84□□□□□ -0.35
ABCA3-203ENST00000563623 DENND2CQ68D51 928 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 TCP11Q8WWU5 503 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 REEP2Q9BRK0 252 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 ANO3Q9BYT9 981 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 CTTNBP2NLQ9P2B4 639 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 GGT7Q9UJ14 662 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 CCDC188H7C350 402 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 RGS16O15492 202 aaPredicted RBP12.84□□□□□ -0.35
ABCA3-203ENST00000563623 AKAP3O75969 853 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 CLTAP09496 248 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 ZNF543Q08ER8 600 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 ORC2Q13416 577 aaPredicted RBP12.84□□□□□ -0.35
ABCA3-203ENST00000563623 HIBCHQ6NVY1 386 aaPredicted RBP12.84□□□□□ -0.35
ABCA3-203ENST00000563623 LRIG3Q6UXM1 1119 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 IRF2BP2Q7Z5L9 587 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 CD302Q8IX05 232 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 SYCP3Q8IZU3 236 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
ABCA3-203ENST00000563623 CD2APQ9Y5K6 639 aa12.84□□□□□ -0.35
ABCA3-203ENST00000563623 EZRP15311 586 aaKnown RBP12.83□□□□□ -0.35
ABCA3-203ENST00000563623 DR1Q01658 176 aa12.83□□□□□ -0.35
ABCA3-203ENST00000563623 KCNA1Q09470 495 aa12.83□□□□□ -0.35
ABCA3-203ENST00000563623 GRAPQ13588 217 aa12.83□□□□□ -0.35
ABCA3-203ENST00000563623 FAM133BQ5BKY9 247 aaKnown RBP12.83□□□□□ -0.35
ABCA3-203ENST00000563623 TPH2Q8IWU9 490 aa12.83□□□□□ -0.35
ABCA3-203ENST00000563623 GRAPLQ8TC17 118 aaPredicted RBP12.83□□□□□ -0.35
ABCA3-203ENST00000563623 HVCN1Q96D96 273 aa12.83□□□□□ -0.35
ABCA3-203ENST00000563623 SGSM3Q96HU1 749 aa12.83□□□□□ -0.35
ABCA3-203ENST00000563623 RAB17Q9H0T7 212 aa12.83□□□□□ -0.35
ABCA3-203ENST00000563623 FAM114A2Q9NRY5 505 aa12.83□□□□□ -0.35
ABCA3-203ENST00000563623 USP40Q9NVE5 1235 aa12.83□□□□□ -0.35
ABCA3-203ENST00000563623 CCNL1Q9UK58 526 aaPredicted RBP12.83□□□□□ -0.35
ABCA3-203ENST00000563623 PTPN22Q9Y2R2 807 aa12.83□□□□□ -0.35
ABCA3-203ENST00000563623 LRP5O75197 1615 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 FNTAP49354 379 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 CCDC38Q502W7 563 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 C10orf76Q5T2E6 689 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 ANKS4BQ8N8V4 417 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 ODF2LQ9ULJ1 636 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms